RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
RAD50-201ENST00000378823 RNF34Q969K3 372 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 STRN3Q13033 797 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 PAK2Q13177 524 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 CCDC38Q502W7 563 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 TMTC1Q8IUR5 882 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
RAD50-201ENST00000378823 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
RAD50-201ENST00000378823 TMEM87BQ96K49 555 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 RAB17Q9H0T7 212 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
RAD50-201ENST00000378823 CCDC169A6NNP5 214 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
RAD50-201ENST00000378823 TFCP2Q12800 502 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 CABS1Q96KC9 395 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 RAB3IPQ96QF0 476 aaPredicted RBP12.46□□□□□ -0.41
RAD50-201ENST00000378823 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
RAD50-201ENST00000378823 PARP2Q9UGN5 583 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 TBC1D8O95759 1140 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 ELF2Q15723 593 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
RAD50-201ENST00000378823 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.41
RAD50-201ENST00000378823 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 IRX4P78413 519 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 GABPAQ06546 454 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 SLC39A6Q13433 755 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 HHATQ5VTY9 493 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 SH2D4AQ9H788 454 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 FAM114A2Q9NRY5 505 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 BCAP29Q9UHQ4 241 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.42
RAD50-201ENST00000378823 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.425e-6■■■■□ 24.7
RAD50-201ENST00000378823 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.42
RAD50-201ENST00000378823 ARHGAP6O43182 974 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 FANCCQ00597 558 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 RILPQ96NA2 401 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 CUL4BQ13620 913 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 DCUN1D2Q6PH85 259 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 CUTAO60888 179 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 GABPB1Q06547 395 aaPredicted RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 MAP7Q14244 749 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 POSTNQ15063 836 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 HMGB1P1B2RPK0 211 aaPredicted RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 HGSO14964 777 aaPredicted RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 HARSP12081 509 aaKnown RBP12.45□□□□□ -0.42
RAD50-201ENST00000378823 KRT15P19012 456 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
RAD50-201ENST00000378823 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 GSDMBQ8TAX9 411 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 CARD6Q9BX69 1037 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 MRPL44Q9H9J2 332 aaKnown RBP12.44□□□□□ -0.42
RAD50-201ENST00000378823 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
RAD50-201ENST00000378823 TXNDC9O14530 226 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
RAD50-201ENST00000378823 CALCRLQ16602 461 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
RAD50-201ENST00000378823 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 ANKRD20A3Q5VUR7 823 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 CERS3Q8IU89 383 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 GCNT3O95395 438 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 PPP4R1Q8TF05 950 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 SETSIPP0DME0 302 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 ZNF75DP51815 510 aa12.44□□□□□ -0.42
RAD50-201ENST00000378823 PPFIA2O75334 1257 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 FBLN1P23142 703 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 PPP2R5DQ14738 602 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 DDX41Q9UJV9 622 aaKnown RBP12.43□□□□□ -0.42
RAD50-201ENST00000378823 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
RAD50-201ENST00000378823 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
RAD50-201ENST00000378823 CACYBPQ9HB71 228 aaKnown RBP12.43□□□□□ -0.42
RAD50-201ENST00000378823 ARHGEF35A5YM69 484 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 DKC1O60832 514 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAD50-201ENST00000378823 MAP3K21Q5TCX8 1036 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
RAD50-201ENST00000378823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAD50-201ENST00000378823 PDE1CQ14123 709 aaPredicted RBP12.43□□□□□ -0.42
RAD50-201ENST00000378823 RPS6KA1Q15418 735 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms