RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 MAGEB6Q8N7X4 407 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 HAUS7Q99871 368 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
RER1-202ENST00000378512 ARHGAP39Q9C0H5 1083 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 PTPRFP10586 1907 aa20.68■□□□□ 0.9
RER1-202ENST00000378512 CYP7A1P22680 504 aa20.67■□□□□ 0.9
RER1-202ENST00000378512 PPATQ06203 517 aa20.67■□□□□ 0.9
RER1-202ENST00000378512 BRCA2P51587 3418 aa20.66■□□□□ 0.9
RER1-202ENST00000378512 HDAC1Q13547 482 aaPredicted RBP20.66■□□□□ 0.9
RER1-202ENST00000378512 MOGSQ13724 837 aa20.66■□□□□ 0.9
RER1-202ENST00000378512 METTL16Q86W50 562 aaKnown RBP20.66■□□□□ 0.9
RER1-202ENST00000378512 FLT1P17948 1338 aa20.65■□□□□ 0.9
RER1-202ENST00000378512 TCRBV5S4A2TA0A5A2 114 aa20.65■□□□□ 0.9
RER1-202ENST00000378512 GOLIM4O00461 696 aa20.65■□□□□ 0.9
RER1-202ENST00000378512 DYNLL1P63167 89 aaKnown RBP20.65■□□□□ 0.9
RER1-202ENST00000378512 ZSCAN29Q8IWY8 852 aaPredicted RBP20.65■□□□□ 0.9
RER1-202ENST00000378512 RIOK1Q9BRS2 568 aaKnown RBP20.65■□□□□ 0.9
RER1-202ENST00000378512 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
RER1-202ENST00000378512 BOLA2Q9H3K6 86 aa20.65■□□□□ 0.9
RER1-202ENST00000378512 PAG1Q9NWQ8 432 aa20.65■□□□□ 0.9
RER1-202ENST00000378512 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.65■□□□□ 0.9
RER1-202ENST00000378512 PDE4DIPQ5VU43 2346 aa20.64■□□□□ 0.9
RER1-202ENST00000378512 TLR2O60603 784 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 PDE6AP16499 860 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 TGFBRAP1Q8WUH2 860 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 EDC3Q96F86 508 aaKnown RBP20.64■□□□□ 0.89
RER1-202ENST00000378512 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
RER1-202ENST00000378512 ECHDC1Q9NTX5 307 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 KCNH4Q9UQ05 1017 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 PTCH2Q9Y6C5 1203 aa20.64■□□□□ 0.89
RER1-202ENST00000378512 SLC9C2Q5TAH2 1124 aa20.63■□□□□ 0.89
RER1-202ENST00000378512 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
RER1-202ENST00000378512 MKI67P46013 3256 aaKnown RBP20.63■□□□□ 0.89
RER1-202ENST00000378512 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 CTNND1O60716 968 aaKnown RBP20.62■□□□□ 0.89
RER1-202ENST00000378512 CTGFP29279 349 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 CCDC84Q86UT8 332 aaPredicted RBP20.62■□□□□ 0.89
RER1-202ENST00000378512 SCYL3Q8IZE3 742 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 ARMC5Q96C12 935 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 PI4KBQ9UBF8 816 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 CPA4Q9UI42 421 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 HERC5Q9UII4 1024 aaKnown RBP20.62■□□□□ 0.89
RER1-202ENST00000378512 SALL3Q9BXA9 1300 aa20.62■□□□□ 0.89
RER1-202ENST00000378512 PDHXO00330 501 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 GCC1Q96CN9 775 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 ADGRA2Q96PE1 1338 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 ZNF532Q9HCE3 1301 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 ADD2P35612 726 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 LACTBP83111 547 aaPredicted RBP20.61■□□□□ 0.89
RER1-202ENST00000378512 GPAT2Q6NUI2 795 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 C17orf99Q6UX52 265 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 ANKRD23Q86SG2 305 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 MAPKAPK5Q8IW41 473 aa20.61■□□□□ 0.89
RER1-202ENST00000378512 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
RER1-202ENST00000378512 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
RER1-202ENST00000378512 MYCP01106 439 aaPredicted RBP20.6■□□□□ 0.89
RER1-202ENST00000378512 PTPRAP18433 802 aa20.6■□□□□ 0.89
RER1-202ENST00000378512 BCL11AQ9H165 835 aa20.6■□□□□ 0.89
RER1-202ENST00000378512 DNAJC18Q9H819 358 aa20.6■□□□□ 0.89
RER1-202ENST00000378512 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■□□□□ 10.4
RER1-202ENST00000378512 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
RER1-202ENST00000378512 ZHX2Q9Y6X8 837 aa20.6■□□□□ 0.89
RER1-202ENST00000378512 EN2P19622 333 aaPredicted RBP20.59■□□□□ 0.89
RER1-202ENST00000378512 UBE3CQ15386 1083 aa20.59■□□□□ 0.89
RER1-202ENST00000378512 FOXP4Q8IVH2 680 aaPredicted RBP20.59■□□□□ 0.89
RER1-202ENST00000378512 EXOC6Q8TAG9 804 aa20.59■□□□□ 0.89
RER1-202ENST00000378512 RBBP6Q7Z6E9 1792 aaKnown RBP20.58■□□□□ 0.88
RER1-202ENST00000378512 MAGEB6P1A0A0J9YX57 407 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 CXCL11O14625 94 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 CYP2C8P10632 490 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 RRP1BQ14684 758 aaKnown RBP20.58■□□□□ 0.88
RER1-202ENST00000378512 PI4K2BQ8TCG2 481 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 SH3TC2Q8TF17 1288 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 GPATCH3Q96I76 525 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 ZNF333Q96JL9 665 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.888e-12■■□□□ 14.3
RER1-202ENST00000378512 PALD1Q9ULE6 856 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 AFG3L2Q9Y4W6 797 aa20.58■□□□□ 0.88
RER1-202ENST00000378512 CAP2P40123 477 aa20.57■□□□□ 0.88
RER1-202ENST00000378512 SMC5Q8IY18 1101 aa20.57■□□□□ 0.88
RER1-202ENST00000378512 TRIM47Q96LD4 638 aa20.57■□□□□ 0.88
RER1-202ENST00000378512 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
RER1-202ENST00000378512 LOC285556D6RIA3 1793 aa20.57■□□□□ 0.88
RER1-202ENST00000378512 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
RER1-202ENST00000378512 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
RER1-202ENST00000378512 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
RER1-202ENST00000378512 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
RER1-202ENST00000378512 EHD4Q9H223 541 aa20.56■□□□□ 0.88
RER1-202ENST00000378512 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
RER1-202ENST00000378512 SLC34A2O95436 690 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 CHGBP05060 677 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 USP5P45974 858 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 SLFNL1Q499Z3 407 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 PRPF38BQ5VTL8 546 aaKnown RBP20.55■□□□□ 0.88
RER1-202ENST00000378512 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
RER1-202ENST00000378512 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
RER1-202ENST00000378512 TRIM75PA6NK02 468 aa20.54■□□□□ 0.88
RER1-202ENST00000378512 PSMC4P43686 418 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms