RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BMP6P22004 513 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 PDE4BQ07343 736 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 AK7Q96M32 723 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
MSH5-201ENST00000375703 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
MSH5-201ENST00000375703 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
MSH5-201ENST00000375703 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 CCDC93Q567U6 631 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 BCL9O00512 1426 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
MSH5-201ENST00000375703 PTPREP23469 700 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 BCAMP50895 628 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 ETF1P62495 437 aaKnown RBP16.7■□□□□ 0.26
MSH5-201ENST00000375703 GRIN1Q05586 938 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 FBXO38Q6PIJ6 1188 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 CMTR1Q8N1G2 835 aaKnown RBP16.7■□□□□ 0.26
MSH5-201ENST00000375703 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
MSH5-201ENST00000375703 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
MSH5-201ENST00000375703 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 DEXIO95424 95 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 POSTNQ15063 836 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 PTPN21Q16825 1174 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 SUSD4Q5VX71 490 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
MSH5-201ENST00000375703 MAN1B1Q9UKM7 699 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
MSH5-201ENST00000375703 NUP133Q8WUM0 1156 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
MSH5-201ENST00000375703 GOLGA8FQ08AF8 430 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 GOLGA8DPQ0D2H9 430 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 ERCC6LQ2NKX8 1250 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 MIGA1Q8NAN2 632 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 LRP2BPQ9P2M1 347 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
MSH5-201ENST00000375703 NID2Q14112 1375 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 PNPLA7Q6ZV29 1317 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 NR5A1Q13285 461 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.265e-8■■□□□ 12.7
MSH5-201ENST00000375703 MYH3P11055 1940 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 EXOC5O00471 708 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 MLKLQ8NB16 471 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 SMARCE1Q969G3 411 aa16.68■□□□□ 0.26
MSH5-201ENST00000375703 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
MSH5-201ENST00000375703 LRP6O75581 1613 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 REXO1L1PQ8IX06 675 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
MSH5-201ENST00000375703 MTA3Q9BTC8 594 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
MSH5-201ENST00000375703 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
MSH5-201ENST00000375703 PHLPP2Q6ZVD8 1323 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 IGSF3O75054 1194 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
MSH5-201ENST00000375703 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 TRIM65Q6PJ69 517 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 UBAC1Q9BSL1 405 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 INTS13Q9NVM9 706 aa16.67■□□□□ 0.26
MSH5-201ENST00000375703 IGHMBP2P38935 993 aaKnown RBP16.66■□□□□ 0.26
MSH5-201ENST00000375703 FCHSD1Q86WN1 690 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 PDILTQ8N807 584 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 OXER1Q8TDS5 423 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 NFE2L3Q9Y4A8 694 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
MSH5-201ENST00000375703 PPARAQ07869 468 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 MORC3Q14149 939 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 CCDC152Q4G0S7 254 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 LRRN4CLQ8ND94 238 aa16.66■□□□□ 0.26
MSH5-201ENST00000375703 ENOX1Q8TC92 643 aaKnown RBP16.66■□□□□ 0.26
MSH5-201ENST00000375703 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
MSH5-201ENST00000375703 GRAMD1CQ8IYS0 662 aa16.65■□□□□ 0.26
MSH5-201ENST00000375703 NUP98P52948 1817 aa16.65■□□□□ 0.26
MSH5-201ENST00000375703 CYP7A1P22680 504 aa16.65■□□□□ 0.26
MSH5-201ENST00000375703 RCAN1P53805 252 aa16.65■□□□□ 0.26
MSH5-201ENST00000375703 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
MSH5-201ENST00000375703 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
MSH5-201ENST00000375703 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
MSH5-201ENST00000375703 ITGB4P16144 1822 aa16.64■□□□□ 0.26
MSH5-201ENST00000375703 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 GABPB1Q06547 395 aaPredicted RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 PDE4CQ08493 712 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 TMEM139Q8IV31 216 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms