RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 FAM8A1Q9UBU6 413 aa9.28□□□□□ -0.92
HSPG2-203ENST00000374695 RBM8AQ9Y5S9 174 aaKnown RBP9.28□□□□□ -0.92
HSPG2-203ENST00000374695 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.92
HSPG2-203ENST00000374695 VEZTQ9HBM0 779 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 TNNI2P48788 182 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 CASC4Q6P4E1 433 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 PPP1R21Q6ZMI0 780 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 ITGB1BP2Q9UKP3 347 aa9.27□□□□□ -0.92
HSPG2-203ENST00000374695 TRIM37O94972 964 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 PHEXP78562 749 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
HSPG2-203ENST00000374695 ANKFY1Q9P2R3 1169 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 ARHGAP6O43182 974 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 RNASELQ05823 741 aaKnown RBP9.27□□□□□ -0.93
HSPG2-203ENST00000374695 UBE3BQ7Z3V4 1068 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-203ENST00000374695 FAM71BQ8TC56 605 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 DACT3Q96B18 629 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-203ENST00000374695 CCDC51Q96ER9 411 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 DHX32Q7L7V1 743 aaKnown RBP9.27□□□□□ -0.93
HSPG2-203ENST00000374695 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.27□□□□□ -0.933e-7■□□□□ 10.3
HSPG2-203ENST00000374695 CACNA1FO60840 1977 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 ZC4H2Q9NQZ6 224 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 BIRC3Q13489 604 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 STAG1Q8WVM7 1258 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 NRBF2Q96F24 287 aa9.27□□□□□ -0.93
HSPG2-203ENST00000374695 PALM3A6NDB9 673 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PAG1Q9NWQ8 432 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 IL15P40933 162 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 KRT12Q99456 494 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 HOMER3Q9NSC5 361 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 BRDTQ58F21 947 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PFDN1O60925 122 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PLS1Q14651 629 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 KRT15P19012 456 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 DCUN1D2Q6PH85 259 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 IGF1RP08069 1367 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 EIF3CLB5ME19 914 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 STRN3Q13033 797 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 EIF3CQ99613 913 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 SH2D4AQ9H788 454 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ZSCAN26Q16670 478 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 NYXQ9GZU5 481 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 TBC1D8O95759 1140 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ATP2B3Q16720 1220 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 SEPT8Q92599 483 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 CUTAO60888 179 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ALDH1L1O75891 902 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PARP1P09874 1014 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ZNF526Q8TF50 670 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 CCDC93Q567U6 631 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 OAS2P29728 719 aaKnown RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ANKRD20A4Q4UJ75 823 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ANKRD20A2Q5SQ80 823 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 ANKRD20A1Q5TYW2 823 aa9.26□□□□□ -0.93
HSPG2-203ENST00000374695 NBPF5PQ86XG9 351 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-203ENST00000374695 MYH8P13535 1937 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 CYP7A1P22680 504 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 LRGUKQ96M69 825 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 AOX1Q06278 1338 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 PEX26Q7Z412 305 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 EFCAB13Q8IY85 973 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 TTC4O95801 387 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 MAP3K7CLP57077 242 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 FAM212AQ96EL1 285 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 ZFYVE9O95405 1425 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 APBA1Q02410 837 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 RIPOR2Q9Y4F9 1068 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 RNF8O76064 485 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 MIS12Q9H081 205 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 BBOF1Q8ND07 529 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 PTCD1O75127 700 aaKnown RBP9.25□□□□□ -0.93
HSPG2-203ENST00000374695 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
HSPG2-203ENST00000374695 TEKT1Q969V4 418 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 SPC25Q9HBM1 224 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
HSPG2-203ENST00000374695 STX2P32856 288 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 MRC2Q9UBG0 1479 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 EFHD1Q9BUP0 239 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 MAN1A1P33908 653 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
HSPG2-203ENST00000374695 KRT71Q3SY84 523 aa9.25□□□□□ -0.93
HSPG2-203ENST00000374695 DTNBP1Q96EV8 351 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms