RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 ZKSCAN3Q9BRR0 538 aa19.54■□□□□ 0.72
PHF1-202ENST00000374516 GJB4Q9NTQ9 266 aa19.54■□□□□ 0.72
PHF1-202ENST00000374516 TNRC6CQ9HCJ0 1690 aaKnown RBP19.54■□□□□ 0.72
PHF1-202ENST00000374516 ZMYM6O95789 1325 aa19.54■□□□□ 0.72
PHF1-202ENST00000374516 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
PHF1-202ENST00000374516 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 NFXL1Q6ZNB6 911 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 KCND1Q9NSA2 647 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 ANO10Q9NW15 660 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 GRAPQ13588 217 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 TAF3Q5VWG9 929 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 KRT222Q8N1A0 295 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
PHF1-202ENST00000374516 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
PHF1-202ENST00000374516 RIOK1Q9BRS2 568 aaKnown RBP19.53■□□□□ 0.72
PHF1-202ENST00000374516 FTOQ9C0B1 505 aaKnown RBP eCLIP19.53■□□□□ 0.72
PHF1-202ENST00000374516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
PHF1-202ENST00000374516 PRDX5P30044 214 aa19.52■□□□□ 0.72
PHF1-202ENST00000374516 PROM2Q8N271 834 aa19.52■□□□□ 0.72
PHF1-202ENST00000374516 ENGASEQ8NFI3 743 aa19.52■□□□□ 0.72
PHF1-202ENST00000374516 CHMP4CQ96CF2 233 aa19.52■□□□□ 0.72
PHF1-202ENST00000374516 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
PHF1-202ENST00000374516 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
PHF1-202ENST00000374516 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.52■□□□□ 0.72
PHF1-202ENST00000374516 V9GYY5 206 aaPredicted RBP19.52■□□□□ 0.72
PHF1-202ENST00000374516 GOLGB1Q14789 3259 aaKnown RBP19.52■□□□□ 0.72
PHF1-202ENST00000374516 A0A087WWV3 80 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 IFIT3O14879 490 aaKnown RBP19.52■□□□□ 0.71
PHF1-202ENST00000374516 SERPINB2P05120 415 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 METAP2P50579 478 aaKnown RBP eCLIP19.52■□□□□ 0.714e-6■■□□□ 13.2
PHF1-202ENST00000374516 MECOMQ03112 1051 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 APOA5Q6Q788 366 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 CCDC73Q6ZRK6 1079 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 TMEM87BQ96K49 555 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 LY9Q9HBG7 655 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 FAM53CQ9NYF3 392 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 PODXL2Q9NZ53 605 aa19.52■□□□□ 0.71
PHF1-202ENST00000374516 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
PHF1-202ENST00000374516 TERF2Q15554 542 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 NSUN4Q96CB9 384 aaKnown RBP19.51■□□□□ 0.71
PHF1-202ENST00000374516 CYP2D7A0A087X1C5 515 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 SEMA3EO15041 775 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 PPARAQ07869 468 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 STAG1Q8WVM7 1258 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
PHF1-202ENST00000374516 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
PHF1-202ENST00000374516 CDC27P30260 824 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 FAM160A1Q05DH4 1040 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 TXNRD1Q16881 649 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 FBXO38Q6PIJ6 1188 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 KRT23Q9C075 422 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 CNNM2Q9H8M5 875 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 SLU7O95391 586 aaKnown RBP19.5■□□□□ 0.71
PHF1-202ENST00000374516 ATL3Q6DD88 541 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
PHF1-202ENST00000374516 AATFQ9NY61 560 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHF1-202ENST00000374516 ZBTB43O43298 467 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 GSDMDP57764 484 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 ELF2Q15723 593 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 ILDR1Q86SU0 546 aaPredicted RBP19.49■□□□□ 0.71
PHF1-202ENST00000374516 CEP57L1Q8IYX8 460 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 PHKBQ93100 1093 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 AIFM3Q96NN9 605 aa19.49■□□□□ 0.71
PHF1-202ENST00000374516 KIF2AO00139 706 aaPredicted RBP19.48■□□□□ 0.71
PHF1-202ENST00000374516 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 AOPEPQ8N6M6 819 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 ZNF396Q96N95 335 aaPredicted RBP19.48■□□□□ 0.71
PHF1-202ENST00000374516 NAT10Q9H0A0 1025 aaKnown RBP19.48■□□□□ 0.71
PHF1-202ENST00000374516 IRS2Q9Y4H2 1338 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 ST5P78524 1137 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 DDR1Q08345 913 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 NBPF11Q86T75 865 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 OSBPL5Q9H0X9 879 aaPredicted RBP19.48■□□□□ 0.71
PHF1-202ENST00000374516 SLC12A7Q9Y666 1083 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 BRWD3Q6RI45 1802 aa19.48■□□□□ 0.71
PHF1-202ENST00000374516 ME1P48163 572 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 SGMS1Q86VZ5 419 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 FSIP1Q8NA03 581 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 ERCC4Q92889 916 aaPredicted RBP19.47■□□□□ 0.71
PHF1-202ENST00000374516 UBR3Q6ZT12 1888 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 POLR3DP05423 398 aaPredicted RBP19.47■□□□□ 0.71
PHF1-202ENST00000374516 EVX2Q03828 476 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 FBXO18Q8NFZ0 1043 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 IMPACTQ9P2X3 320 aa19.47■□□□□ 0.71
PHF1-202ENST00000374516 GOLGA8AA7E2F4 631 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 PRDM1O75626 825 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 LIFRP42702 1097 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 GPSM2P81274 684 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 FAM217BQ9NTX9 383 aaPredicted RBP19.46■□□□□ 0.71
PHF1-202ENST00000374516 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
PHF1-202ENST00000374516 LEMD3Q9Y2U8 911 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 XDHP47989 1333 aa19.46■□□□□ 0.71
PHF1-202ENST00000374516 WTAPQ15007 396 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 CRY2Q49AN0 593 aa19.45■□□□□ 0.7
PHF1-202ENST00000374516 E4F1Q66K89 784 aaPredicted RBP19.45■□□□□ 0.7
PHF1-202ENST00000374516 FMR1NBQ8N0W7 255 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms