RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 CLIC4Q9Y696 253 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 KIAA0232Q92628 1395 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 UFL1O94874 794 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PUM3Q15397 648 aaKnown RBP10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 TSG101Q99816 390 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 KIF2AO00139 706 aaPredicted RBP10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PDE8AO60658 829 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PAFAH1B1P43034 410 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 ZNF75DP51815 510 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 FANCCQ00597 558 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 MTX1Q13505 466 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 HIBADHP31937 336 aaKnown RBP10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 KRT2P35908 639 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 MYL5Q02045 173 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 ELF2Q15723 593 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 GRAMD1CQ8IYS0 662 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 TMTC2Q8N394 836 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 PAF1Q8N7H5 531 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 CCNL1Q9UK58 526 aaPredicted RBP10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 CTNND2Q9UQB3 1225 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 CHMP2AO43633 222 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 NEMFO60524 1076 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 SLU7O95391 586 aaKnown RBP10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 TTLL12Q14166 644 aaPredicted RBP10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 CCDC150Q8NCX0 1101 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 CARD6Q9BX69 1037 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 TAB2Q9NYJ8 693 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 PDE6AP16499 860 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 IGSF1Q8N6C5 1336 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 USO1O60763 962 aaKnown RBP10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 HOXB7P09629 217 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 CDR1P51861 262 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 NDUFA8P51970 172 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 TFAP4Q01664 338 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 DTHD1Q6ZMT9 781 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 PUS7LQ9H0K6 701 aaKnown RBP10.32□□□□□ -0.76
SMARCA1-202ENST00000371122 PSMA7O14818 248 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 HLA-DOAP06340 250 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 GJC1P36383 396 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 SMYD4Q8IYR2 804 aaPredicted RBP10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 RASGRP4Q8TDF6 673 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 PCDHA7Q9UN72 937 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 SCLT1Q96NL6 688 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 GPR101Q96P66 508 aaPredicted RBP10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 SLIT3O75094 1523 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 IGKV5-2P06315 115 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 PTPN12Q05209 780 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 PRKG1Q13976 671 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 IGSF22Q8N9C0 903 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 CUL5Q93034 780 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 PAXBP1Q9Y5B6 917 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
SMARCA1-202ENST00000371122 PFKFB1P16118 471 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 LPIN2Q92539 896 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 BAG1Q99933 345 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 GSTTP1A0A1W2PQM5 241 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 SMIM23A6NLE4 172 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 KANK3Q6NY19 840 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 MAATS1Q7Z4T9 603 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 IQUBQ8NA54 791 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 IL25Q9H293 177 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 TMEM110-MUSTN1A8MSY1 372 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 CYP27B1O15528 508 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 CAVIN2O95810 425 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 SCNN1DP51172 638 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 ST5P78524 1137 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 NR5A1Q13285 461 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 PI4K2BQ8TCG2 481 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 ARFGAP3Q9NP61 516 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 ABCC6O95255 1503 aa10.3□□□□□ -0.76
SMARCA1-202ENST00000371122 M0R2C6 588 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CCDC175P0C221 793 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 DYNLL1P63167 89 aaKnown RBP10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 IFNL3Q8IZI9 196 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 CCDC87Q9NVE4 849 aa10.29□□□□□ -0.76
SMARCA1-202ENST00000371122 KIAA0754O94854 1291 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms