RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MYRIPQ8NFW9 859 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 PUF60Q9UHX1 559 aaKnown RBP13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 VPS16Q9H269 839 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 FGAP02671 866 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 EVCP57679 992 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
DEPDC1-201ENST00000370966 B4DLN1 442 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 CYP26C1Q6V0L0 522 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 IMPG2Q9BZV3 1241 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 OGFRQ9NZT2 677 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 PPARAQ07869 468 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 CMA1P23946 247 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
DEPDC1-201ENST00000370966 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 STK24Q9Y6E0 443 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ABCC3O15438 1527 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 PHACTR2O75167 634 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ARFGAP2Q8N6H7 521 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ZCCHC11Q5TAX3 1644 aaKnown RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 TNNC1P63316 161 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 TIGD1Q96MW7 591 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 VEZTQ9HBM0 779 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 PDE8BO95263 885 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 PCP11498 1178 aaKnown RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 CALRP27797 417 aaKnown RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 TFAP4Q01664 338 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 GPT2Q8TD30 523 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 NAPGQ99747 312 aaPredicted RBP13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 FERMT1Q9BQL6 677 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
DEPDC1-201ENST00000370966 CETN3O15182 167 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 KRT9P35527 623 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 GPCPD1Q9NPB8 672 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 ZMYM6O95789 1325 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 ADCY9O60503 1353 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 DTNBO60941 627 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 NR1I2O75469 434 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 PFKFB1P16118 471 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 MAP3K4Q9Y6R4 1608 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 USP17L21D6R901 530 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 PDIA3P30101 505 aaKnown RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 TXKP42681 527 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 CCDC84Q86UT8 332 aaPredicted RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 CAPZA3Q96KX2 299 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 MRVI1Q9Y6F6 885 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 CCNT1O60563 726 aaKnown RBP13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 HDXQ7Z353 690 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 TRIML1Q8N9V2 468 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
DEPDC1-201ENST00000370966 TRPM1Q7Z4N2 1603 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 A0A1W2PQ27 194 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 A0A1W2PQ64 194 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 A0A1W2PQD8 194 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 RHOXF2BP0C7M4 288 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 TICAM2Q86XR7 235 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 RHOXF2Q9BQY4 288 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 STMN4Q9H169 189 aaPredicted RBP13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 ERBB3P21860 1342 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 EPB41P11171 864 aaKnown RBP13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 IQCDQ96DY2 449 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 XPO4Q9C0E2 1151 aaKnown RBP13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 CDC42BPAQ5VT25 1732 aa13.28□□□□□ -0.28
DEPDC1-201ENST00000370966 CAPN2P17655 700 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms