RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 VPS53Q5VIR6 699 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 DYDC2Q96IM9 177 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 TRIM4Q9C037 500 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MID2Q9UJV3 735 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ANGPTL3Q9Y5C1 460 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MROH7Q68CQ1 1323 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 KIF23Q02241 960 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ADSLP30566 484 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 RNF169Q8NCN4 708 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CABS1Q96KC9 395 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MTRQ99707 1265 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 TROQ12816 1431 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MRPS35P82673 323 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 NME8Q8N427 588 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HARSP12081 509 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MAGEA9P43362 315 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CFAP100Q494V2 611 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PPP1R2P1Q96PQ5 205 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 FRMD8Q9BZ67 464 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CDK13Q14004 1512 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 GOLGA8KD6RF30 607 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 RBM6P78332 1123 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 TTF1Q15361 905 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 RAPGEF4Q8WZA2 1011 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 SIRT1Q96EB6 747 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 SELENOOQ9BVL4 669 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ESRRBO95718 433 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ICE2Q659A1 982 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 LRRC8BQ6P9F7 803 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 BNC1Q01954 994 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 EPS15L1Q9UBC2 864 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 LIG3P49916 1009 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 NEK4P51957 841 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 SWT1Q5T5J6 900 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 COBLO75128 1261 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 RASGRF1Q13972 1273 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 TDRD12Q587J7 1177 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ANKRD20A8PQ5CZ79 823 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 KRT39Q6A163 491 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HDDC2Q7Z4H3 204 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MS4A14Q96JA4 679 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 NDEL1Q9GZM8 345 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 APOA4P06727 396 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PPP1R9AQ9ULJ8 1098 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MYOM2P54296 1465 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CRYMQ14894 314 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PROSER2Q86WR7 435 aaPredicted RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CHUKO15111 745 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 ANO1Q5XXA6 986 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 SPATA32Q96LK8 384 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PLEKHG1Q9ULL1 1385 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 NOLC1Q14978 699 aaKnown RBP eCLIP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 FAM186BQ8IYM0 893 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HVCN1Q96D96 273 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 TSHZ3Q63HK5 1081 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 WAPLQ7Z5K2 1190 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 FAM160A1Q05DH4 1040 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 FGD4Q96M96 766 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 MRPL46Q9H2W6 279 aaKnown RBP4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC63Q8NA47 563 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 MXD3Q9BW11 206 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 SCHIP1Q9P0W5 487 aaPredicted RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 EIF2AK4Q9P2K8 1649 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TUFMP49411 452 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ARHGAP4P98171 946 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TRMT1LQ7Z2T5 733 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ATP8B3O60423 1300 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 AP3B1O00203 1094 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 PDE6CP51160 858 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 NUCB1Q02818 461 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TMOD4Q9NZQ9 345 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC124Q96CT7 223 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 BICD1Q96G01 975 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 PCMTD1Q96MG8 357 aaPredicted RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 GOLGA8AA7E2F4 631 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 GOLGA8BA8MQT2 603 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 PTPN21Q16825 1174 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 EHMT1Q9H9B1 1298 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TCP1P17987 556 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 IFT20Q8IY31 132 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CNBD1Q8NA66 436 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 KDM5BQ9UGL1 1544 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TTLL7Q6ZT98 887 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 G3BP2Q9UN86 482 aaKnown RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TMEM132EQ6IEE7 984 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 A0A087WZG4 1122 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 IWS1Q96ST2 819 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 FAM124BQ9H5Z6 455 aaPredicted RBP4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ANKRD65E5RJM6 399 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CIB2O75838 187 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ZNF165P49910 485 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 ABCC12Q96J65 1359 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 WDR60Q8WVS4 1066 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 EFHD1Q9BUP0 239 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 FYB2Q5VWT5 728 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 RIN3Q8TB24 985 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 TUFT1Q9NNX1 390 aa4.18□□□□□ -1.74
SYNE1-207ENST00000367255 CLASP2O75122 1294 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms