RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 TAF7LQ5H9L4 462 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 MDM2Q00987 491 aaPredicted RBP10.96□□□□□ -0.65
CNIH4-202ENST00000366857 KIAA2012Q0VF49 1180 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 ATL3Q6DD88 541 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 CRACR2BQ8N4Y2 399 aaPredicted RBP10.96□□□□□ -0.65
CNIH4-202ENST00000366857 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.65
CNIH4-202ENST00000366857 WNT7AO00755 349 aa10.96□□□□□ -0.66
CNIH4-202ENST00000366857 PPP1R9BQ96SB3 815 aa10.96□□□□□ -0.66
CNIH4-202ENST00000366857 GOLPH3LQ9H4A5 285 aa10.96□□□□□ -0.66
CNIH4-202ENST00000366857 PALM3A6NDB9 673 aaPredicted RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 CYTH3O43739 400 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 PTMSP20962 102 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 CYP7A1P22680 504 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 DNM1Q05193 864 aaKnown RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 SKOR2Q2VWA4 1001 aaPredicted RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 IDH1O75874 414 aaKnown RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 VEGFAP15692 232 aaPredicted RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 HAND2P61296 217 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 NBR1Q14596 966 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 CRYGNQ8WXF5 182 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 AP5Z1O43299 807 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 EARS2Q5JPH6 523 aaKnown RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 LEO1Q8WVC0 666 aaPredicted RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
CNIH4-202ENST00000366857 KRT23Q9C075 422 aa10.95□□□□□ -0.66
CNIH4-202ENST00000366857 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 SLC16A10Q8TF71 515 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 HSD3B7Q9H2F3 369 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
CNIH4-202ENST00000366857 SMARCA1P28370 1054 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 ALDH1B1P30837 517 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 JAG1P78504 1218 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 RRP1BQ14684 758 aaKnown RBP10.94□□□□□ -0.66
CNIH4-202ENST00000366857 SPATA20Q8TB22 786 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 GJB4Q9NTQ9 266 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 SHMT1P34896 483 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 PLXNB2O15031 1838 aa10.94□□□□□ -0.66
CNIH4-202ENST00000366857 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 STRIP1Q5VSL9 837 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 FAM177A1Q8N128 213 aaPredicted RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 PRPF3O43395 683 aaKnown RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 DDAH1O94760 285 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 USP17L8P0C7I0 530 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 DEKP35659 375 aaKnown RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 UBE2HP62256 183 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 GRIPAP1Q4V328 841 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 DAGLBQ8NCG7 672 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 LINC00301Q8NCQ3 95 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 MKL1Q969V6 931 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 AIFM3Q96NN9 605 aa10.93□□□□□ -0.66
CNIH4-202ENST00000366857 IQSEC3Q9UPP2 1182 aaPredicted RBP10.93□□□□□ -0.66
CNIH4-202ENST00000366857 NMT2O60551 498 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
CNIH4-202ENST00000366857 DGKHQ86XP1 1220 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 FMR1NBQ8N0W7 255 aaPredicted RBP10.92□□□□□ -0.66
CNIH4-202ENST00000366857 GBP4Q96PP9 640 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
CNIH4-202ENST00000366857 TNKSO95271 1327 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 KIAA1217Q5T5P2 1943 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 TMTC3Q6ZXV5 915 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 KDM4AO75164 1064 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 MMP1P03956 469 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 PODNQ7Z5L7 613 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 GNL3LQ9NVN8 582 aaKnown RBP10.92□□□□□ -0.66
CNIH4-202ENST00000366857 THSD7BQ9C0I4 1608 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 GRM4Q14833 912 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 NT5DC1Q5TFE4 455 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 MCTP1Q6DN14 999 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 LRSAM1Q6UWE0 723 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 FTOQ9C0B1 505 aaKnown RBP eCLIP10.92□□□□□ -0.66
CNIH4-202ENST00000366857 SERPINA10Q9UK55 444 aa10.92□□□□□ -0.66
CNIH4-202ENST00000366857 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 USP17L21D6R901 530 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 UFL1O94874 794 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 IL17AQ16552 155 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 CDC42EP5Q6NZY7 148 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 TBC1D22AQ8WUA7 517 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 RNF26Q9BY78 433 aaPredicted RBP10.91□□□□□ -0.66
CNIH4-202ENST00000366857 RBSNQ9H1K0 784 aa10.91□□□□□ -0.66
CNIH4-202ENST00000366857 KLF18A0A0U1RQI7 1052 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms