RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 SERPINA10Q9UK55 444 aa8.09□□□□□ -1.11
RNU1-55P-201ENST00000365510 RPAP1Q9BWH6 1393 aaPredicted RBP8.09□□□□□ -1.12
RNU1-55P-201ENST00000365510 MYO5AQ9Y4I1 1855 aaKnown RBP8.09□□□□□ -1.12
RNU1-55P-201ENST00000365510 SLURP2P0DP57 97 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 BTDP43251 543 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 MMP14P50281 582 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 SREBF2Q12772 1141 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 HHIPL2Q6UWX4 724 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ADGRA1Q86SQ6 560 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 FAM43AQ8N2R8 423 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 LCORLQ8N3X6 602 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZNF384Q8TF68 577 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 BRI3BPQ8WY22 251 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 DSCC1Q9BVC3 393 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 C22orf23Q9BZE7 217 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 CRNKL1Q9BZJ0 848 aaKnown RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 TMEM39BQ9GZU3 492 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ARMT1Q9H993 441 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZNF70Q9UC06 446 aaPredicted RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 COLQQ9Y215 455 aaPredicted RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZSWIM8A7E2V4 1837 aa8.08□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZMYM6O95789 1325 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 APPP05067 770 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 HSPD1P10809 573 aaKnown RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 CTGFP29279 349 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 CRKP46108 304 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 TDO2P48775 406 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 SH3TC2Q8TF17 1288 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 FAM163AQ96GL9 167 aaPredicted RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 MS4A4AQ96JQ5 239 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZDHHC15Q96MV8 337 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 STRBPQ96SI9 672 aaKnown RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 RIOK1Q9BRS2 568 aaKnown RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 MRIQ9BWK5 157 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 USP26Q9BXU7 913 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 EFCC1Q9HA90 598 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 CTNNA3Q9UI47 895 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 RBM8AQ9Y5S9 174 aaKnown RBP8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 PTCH2Q9Y6C5 1203 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 SLC4A4Q9Y6R1 1079 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 MYH2Q9UKX2 1941 aa8.07□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZKSCAN1P17029 563 aaPredicted RBP8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 ANAPC15P60006 121 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 PPP4CP60510 307 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 DYNLL1P63167 89 aaKnown RBP8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 SP3Q02447 781 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 PTH1RQ03431 593 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 MAP3K11Q16584 847 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 VPS53Q5VIR6 699 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 GIMAP6Q6P9H5 292 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 TEX11Q8IYF3 940 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 MAP4K1Q92918 833 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 ZKSCAN4Q969J2 545 aaPredicted RBP8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 NAPBQ9H115 298 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 CEP290O15078 2479 aa8.06□□□□□ -1.12
RNU1-55P-201ENST00000365510 MKI67P46013 3256 aaKnown RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 H0YGN5 161 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 MYO1BO43795 1136 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 HSPA4P34932 840 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 USP5P45974 858 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 FXR1P51114 621 aaKnown RBP eCLIP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 MTFR1Q15390 333 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 IMMTQ16891 758 aaKnown RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 MIGA2Q7L4E1 593 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 SH3RF3Q8TEJ3 882 aaPredicted RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 SDR42E1Q8WUS8 393 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 OTUD5Q96G74 571 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 CFHR5Q9BXR6 569 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 EPB41L4AQ9HCS5 686 aaPredicted RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 TSHZ2Q9NRE2 1034 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 ATP8A2Q9NTI2 1148 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 TRIOBPQ9H2D6 2365 aa8.05□□□□□ -1.12
RNU1-55P-201ENST00000365510 FLT1P17948 1338 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 CCL15-CCL14A0A0B4J2E2 113 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 GSG1L2A8MUP6 293 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 SLC27A2O14975 620 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 FOXP2O15409 715 aa8.04□□□□□ -1.12
RNU1-55P-201ENST00000365510 PRKAB2O43741 272 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms