RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 GSTO1P78417 241 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 SF3A1Q15459 793 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 FAM200AQ8TCP9 573 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 TNKSO95271 1327 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 KIF28PB7ZC32 967 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 ORC4O43929 436 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 KINO60870 393 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 GNL2Q13823 731 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 ANO1Q5XXA6 986 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 MRPS27Q92552 414 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 AATFQ9NY61 560 aaKnown RBP eCLIP21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 PCDHA7Q9UN72 937 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 MRVI1Q9Y6F6 885 aa21.23■□□□□ 0.99
PDLIM7-203ENST00000359895 LRRC37AA6NMS7 1700 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 SPTLC2O15270 562 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 BBOX1O75936 387 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 LDHBP07195 334 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 CKAP2LQ8IYA6 745 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 STK11IPQ8N1F8 1099 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 FSIP1Q8NA03 581 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 FANCBQ8NB91 859 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 ENGASEQ8NFI3 743 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 AIFM3Q96NN9 605 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 ZSCAN10Q96SZ4 725 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 DCP1AQ9NPI6 582 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 CLIC4Q9Y696 253 aa21.22■□□□□ 0.99
PDLIM7-203ENST00000359895 USP17L12C9JPN9 530 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 USP17L21D6R901 530 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 DEXIO95424 95 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 CALM1P0DP23 149 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 CALM2P0DP24 149 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 CALM3P0DP25 149 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 MSNP26038 577 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 U2AF2P26368 475 aaKnown RBP eCLIP21.21■□□□□ 0.992e-9■■■□□ 16.8
PDLIM7-203ENST00000359895 GOLPH3LQ9H4A5 285 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 GJB4Q9NTQ9 266 aa21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDLIM7-203ENST00000359895 NAV1Q8NEY1 1877 aa21.2■□□□□ 0.99
PDLIM7-203ENST00000359895 LDHCP07864 332 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 SF3B2Q13435 895 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 SAFBQ15424 915 aaKnown RBP eCLIP21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 TMC4Q7Z404 712 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 DEFB132Q7Z7B7 95 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 CERS3Q8IU89 383 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 CRAMP1Q96RY5 1269 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 USP25Q9UHP3 1055 aa21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 NOL7Q9UMY1 257 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-203ENST00000359895 GPSM2P81274 684 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 SNW1Q13573 536 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 CATIPQ7Z7H3 387 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 JMYQ8N9B5 988 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 RBM28Q9NW13 759 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 CYP2D7A0A087X1C5 515 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 APBA3O96018 575 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 PDE4BQ07343 736 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 SLC39A14Q15043 492 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 IFIT1BQ5T764 474 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 NBPF11Q86T75 865 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 ENAHQ8N8S7 591 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 NUP133Q8WUM0 1156 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 GGA1Q9UJY5 639 aa21.19■□□□□ 0.98
PDLIM7-203ENST00000359895 RGPD3A6NKT7 1758 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 RGPD4Q7Z3J3 1758 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 DDAH1O94760 285 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 ADCY5O95622 1261 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 BAG3O95817 575 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 ANO6Q4KMQ2 910 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 RNF26Q9BY78 433 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 PODXL2Q9NZ53 605 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 CDK5RAP2Q96SN8 1893 aa21.18■□□□□ 0.98
PDLIM7-203ENST00000359895 ANKRD31Q8N7Z5 1873 aa21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 KLRG2A4D1S0 409 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 PPP6R2O75170 966 aa21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 UFL1O94874 794 aa21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 PPP4CP60510 307 aa21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 FMR1NBQ8N0W7 255 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-203ENST00000359895 LTBP1Q14766 1721 aa21.16■□□□□ 0.98
PDLIM7-203ENST00000359895 MMP1P03956 469 aa21.16■□□□□ 0.98
PDLIM7-203ENST00000359895 AKAP17AQ02040 695 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-203ENST00000359895 DDR1Q08345 913 aa21.16■□□□□ 0.98
PDLIM7-203ENST00000359895 ZKSCAN5Q9Y2L8 839 aa21.16■□□□□ 0.98
PDLIM7-203ENST00000359895 IL1R1P14778 569 aa21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 XBP1P17861 261 aa21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 CMA1P23946 247 aa21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 EN1Q05925 392 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 STX1AQ16623 288 aa21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 AMOTL1Q8IY63 956 aa21.15■□□□□ 0.98
PDLIM7-203ENST00000359895 FOXP1Q9H334 677 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms