RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ARHGEF35A5YM69 484 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 ZRANB2O95218 330 aaKnown RBP eCLIP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 IRX4P78413 519 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 SLC39A6Q13433 755 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 IQCB1Q15051 598 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 LETM2Q2VYF4 491 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 RNF219Q5W0B1 726 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TMEM57Q8N5G2 664 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 PPFIBP2Q8ND30 876 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 SPDL1Q96EA4 605 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 VMP1Q96GC9 406 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 FGD4Q96M96 766 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 C16orf45Q96MC5 204 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 COPRSQ9NQ92 184 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 AKT3Q9Y243 479 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 CCNT1O60563 726 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 DDAH1O94760 285 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 MYL3P08590 195 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 STMN1P16949 149 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TNNI1P19237 187 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TNFAIP3P21580 790 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 PPP2R5EQ16537 467 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 CHD1LQ86WJ1 897 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 ANKS4BQ8N8V4 417 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 ESR2Q92731 530 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 PHF8Q9UPP1 1060 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 INPP5FQ9Y2H2 1132 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 RNF8O76064 485 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 MX1P20591 662 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 NEDD9Q14511 834 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 INTS8Q75QN2 995 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 RSRC2Q7L4I2 434 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 RILPQ96NA2 401 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TRIM31Q9BZY9 425 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 STMN4Q9H169 189 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 XAB2Q9HCS7 855 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 CAPN12Q6ZSI9 719 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 PHLDB2Q86SQ0 1253 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 ARHGEF2Q92974 986 aaKnown RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TTC14Q96N46 770 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 TEX13AQ9BXU3 409 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-203ENST00000357654 HPS4Q9NQG7 708 aa6.45□□□□□ -1.38
BRCA1-203ENST00000357654 UBXN1Q04323 297 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 IFNL2Q8IZJ0 200 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 BTN2A2Q8WVV5 523 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ZFYVE19Q96K21 471 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 POLR3EQ9NVU0 708 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 TACC1O75410 805 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ZSCAN20P17040 1043 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 TEKT4Q8WW24 435 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ALG1Q9BT22 464 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 GDPD2Q9HCC8 539 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 CCDC88BA6NC98 1476 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 NDUFB5O43674 189 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 MNAT1P51948 309 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 VCPP55072 806 aaKnown RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 GNG11P61952 73 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 DLGAP5Q15398 846 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 DCAF4L1Q3SXM0 396 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 UBXN8O00124 270 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 PYGLP06737 847 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 UQCRFS1P1P0C7P4 283 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 GJB2P29033 226 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 KIF11P52732 1056 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 PHEXP78562 749 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 PDE4DQ08499 809 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 HABP4Q5JVS0 413 aaKnown RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ABHD8Q96I13 439 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 SYNJ1O43426 1573 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ZBTB43O43298 467 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 NPM3O75607 178 aaKnown RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 HMGB1P09429 215 aaKnown RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 SSFA2P28290 1259 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 TBC1D10BQ4KMP7 808 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 DENND2CQ68D51 928 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 RETREG2Q8NC44 543 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 KIF18AQ8NI77 898 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 HVCN1Q96D96 273 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ZFYP08048 801 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 ECE1P42892 770 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 EPHB1P54762 984 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 TSC22D1Q15714 1073 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 FYB2Q5VWT5 728 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 PPHLN1Q8NEY8 458 aaKnown RBP6.44□□□□□ -1.38
BRCA1-203ENST00000357654 OTULINQ96BN8 352 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 PPP1R12CQ9BZL4 782 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 MTUS1Q9ULD2 1270 aa6.44□□□□□ -1.38
BRCA1-203ENST00000357654 SYF2O95926 243 aaKnown RBP6.43□□□□□ -1.38
BRCA1-203ENST00000357654 APOA4P06727 396 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-203ENST00000357654 KRT2P35908 639 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 PTK2BQ14289 1009 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 ATAD2Q6PL18 1390 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 MYCT1Q8N699 235 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 DEPTORQ8TB45 409 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 PLEKHA4Q9H4M7 779 aa6.43□□□□□ -1.38
BRCA1-203ENST00000357654 PLCB1Q9NQ66 1216 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms