RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 WNK4Q96J92 1243 aa19.34■□□□□ 0.69
COPS7B-202ENST00000357490 CLMNQ96JQ2 1002 aa19.34■□□□□ 0.69
COPS7B-202ENST00000357490 FOCADQ5VW36 1801 aa19.33■□□□□ 0.69
COPS7B-202ENST00000357490 DDTLA6NHG4 134 aaPredicted RBP19.33■□□□□ 0.68
COPS7B-202ENST00000357490 GPR25O00155 361 aa19.33■□□□□ 0.68
COPS7B-202ENST00000357490 PRKAB2O43741 272 aa19.33■□□□□ 0.68
COPS7B-202ENST00000357490 USP2O75604 605 aaPredicted RBP19.33■□□□□ 0.68
COPS7B-202ENST00000357490 SH3BP5LQ7L8J4 393 aa19.33■□□□□ 0.68
COPS7B-202ENST00000357490 FAM227BQ96M60 508 aa19.33■□□□□ 0.68
COPS7B-202ENST00000357490 STRBPQ96SI9 672 aaKnown RBP19.33■□□□□ 0.68
COPS7B-202ENST00000357490 OSBPL5Q9H0X9 879 aaPredicted RBP19.33■□□□□ 0.68
COPS7B-202ENST00000357490 FLT1P17948 1338 aa19.32■□□□□ 0.68
COPS7B-202ENST00000357490 USP5P45974 858 aa19.32■□□□□ 0.68
COPS7B-202ENST00000357490 NMIQ13287 307 aaPredicted RBP19.32■□□□□ 0.68
COPS7B-202ENST00000357490 TICAM2Q86XR7 235 aa19.32■□□□□ 0.68
COPS7B-202ENST00000357490 IFNL1Q8IU54 200 aa19.32■□□□□ 0.68
COPS7B-202ENST00000357490 ZSCAN29Q8IWY8 852 aaPredicted RBP19.32■□□□□ 0.68
COPS7B-202ENST00000357490 SDR42E1Q8WUS8 393 aa19.32■□□□□ 0.68
COPS7B-202ENST00000357490 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
COPS7B-202ENST00000357490 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
COPS7B-202ENST00000357490 A0A0D9SFI3 127 aa19.31■□□□□ 0.68
COPS7B-202ENST00000357490 GPAA1O43292 621 aa19.31■□□□□ 0.68
COPS7B-202ENST00000357490 OTUD7BQ6GQQ9 843 aa19.31■□□□□ 0.68
COPS7B-202ENST00000357490 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
COPS7B-202ENST00000357490 RPAP1Q9BWH6 1393 aaPredicted RBP19.31■□□□□ 0.68
COPS7B-202ENST00000357490 FKTNO75072 461 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 CCDC129Q6ZRS4 1044 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 MIGA2Q7L4E1 593 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 HOOK2Q96ED9 719 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 HELLSQ9NRZ9 838 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 PALD1Q9ULE6 856 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 SLC4A4Q9Y6R1 1079 aa19.3■□□□□ 0.68
COPS7B-202ENST00000357490 TNRC18O15417 2968 aaPredicted RBP19.29■□□□□ 0.68
COPS7B-202ENST00000357490 SLURP2P0DP57 97 aa19.29■□□□□ 0.68
COPS7B-202ENST00000357490 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
COPS7B-202ENST00000357490 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
COPS7B-202ENST00000357490 ATRNL1Q5VV63 1379 aa19.29■□□□□ 0.68
COPS7B-202ENST00000357490 PDE4DIPQ5VU43 2346 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 MYH1P12882 1939 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 CWC27Q6UX04 472 aaKnown RBP19.28■□□□□ 0.68
COPS7B-202ENST00000357490 DIAPH3Q9NSV4 1193 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 CSADQ9Y600 493 aa19.28■□□□□ 0.68
COPS7B-202ENST00000357490 GSG1L2A8MUP6 293 aa19.27■□□□□ 0.68
COPS7B-202ENST00000357490 HIP1O00291 1037 aa19.27■□□□□ 0.68
COPS7B-202ENST00000357490 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.68
COPS7B-202ENST00000357490 DHX36Q9H2U1 1008 aaKnown RBP19.27■□□□□ 0.68
COPS7B-202ENST00000357490 ELP3Q9H9T3 547 aa19.27■□□□□ 0.68
COPS7B-202ENST00000357490 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.68
COPS7B-202ENST00000357490 COL2A1P02458 1487 aaPredicted RBP19.27■□□□□ 0.67
COPS7B-202ENST00000357490 IGF2BP3O00425 579 aaKnown RBP eCLIP19.26■□□□□ 0.67
COPS7B-202ENST00000357490 CHMLP26374 656 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 MAP3K9P80192 1104 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
COPS7B-202ENST00000357490 OPTNQ96CV9 577 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 HPS5Q9UPZ3 1129 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 NAV1Q8NEY1 1877 aa19.26■□□□□ 0.67
COPS7B-202ENST00000357490 BAZ2AQ9UIF9 1905 aaKnown RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 FAM196BA6NMK8 535 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 PATL2C9JE40 543 aaKnown RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 APPP05067 770 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 GNAT2P19087 354 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 GJA5P36382 358 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 EVX2Q03828 476 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 VGLL4Q14135 290 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 FBXO46Q6PJ61 603 aaPredicted RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 IL25Q9H293 177 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 R3HDMLQ9H3Y0 253 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 PI4KBQ9UBF8 816 aa19.25■□□□□ 0.67
COPS7B-202ENST00000357490 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
COPS7B-202ENST00000357490 SIPA1L1O43166 1804 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 FOXP2O15409 715 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 CYP2D6P10635 497 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 PLCD1P51178 756 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 MAP3K10Q02779 954 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 VPS53Q5VIR6 699 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 DCAF15Q66K64 600 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 ZNF341Q9BYN7 854 aa19.24■□□□□ 0.67
COPS7B-202ENST00000357490 EPB41L4AQ9HCS5 686 aaPredicted RBP19.24■□□□□ 0.67
COPS7B-202ENST00000357490 CYP2D7A0A087X1C5 515 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 USP17L21D6R901 530 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 SMIM22K7EJ46 135 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 GTF2A2P52657 109 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 SOX10P56693 466 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 TTC6Q86TZ1 520 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 IFNL3Q8IZI9 196 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.67
COPS7B-202ENST00000357490 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
COPS7B-202ENST00000357490 PHF20L1A8MW92 1017 aa19.22■□□□□ 0.67
COPS7B-202ENST00000357490 TBC1D12O60347 775 aa19.22■□□□□ 0.67
COPS7B-202ENST00000357490 HLA-DOAP06340 250 aa19.22■□□□□ 0.67
COPS7B-202ENST00000357490 CRHR2Q13324 411 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms