RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LRRC24Q50LG9 513 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 MAPKAPK5Q8IW41 473 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 PPP1R14CQ8TAE6 165 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 NAPGQ99747 312 aaPredicted RBP17.96■□□□□ 0.47
PTPN11-201ENST00000351677 MYOM2P54296 1465 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 NF2P35240 595 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 TUBB4BP68371 445 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 MTX1Q13505 466 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 WDR66Q8TBY9 1149 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 OGFRQ9NZT2 677 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 MTMR6Q9Y217 621 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 GPT2Q8TD30 523 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 KIF4AO95239 1232 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 NAP1L4Q99733 375 aaKnown RBP17.95■□□□□ 0.46
PTPN11-201ENST00000351677 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 TLDC2A0PJX2 215 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 EPB41P11171 864 aaKnown RBP17.95■□□□□ 0.46
PTPN11-201ENST00000351677 RNASE9P60153 205 aaKnown RBP17.95■□□□□ 0.46
PTPN11-201ENST00000351677 DYMQ7RTS9 669 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 CCDC25Q86WR0 208 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 FERMT1Q9BQL6 677 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 CDCA7Q9BWT1 371 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-201ENST00000351677 FRMD4BQ9Y2L6 1034 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 TRIM14Q14142 442 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
PTPN11-201ENST00000351677 CCDC97Q96F63 343 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-201ENST00000351677 BACH1O14867 736 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
PTPN11-201ENST00000351677 HDXQ7Z353 690 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 TGFBRAP1Q8WUH2 860 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 USP28Q96RU2 1077 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 IMPACTQ9P2X3 320 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 SERTAD1Q9UHV2 236 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 LMTK3Q96Q04 1460 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 SYNMO15061 1565 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 PPARAQ07869 468 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 PPP1R2P41236 205 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 ELF2Q15723 593 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
PTPN11-201ENST00000351677 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 TNNC1P63316 161 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 TFAP4Q01664 338 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 HAUS7Q99871 368 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 NONOQ15233 471 aaKnown RBP eCLIP17.94■□□□□ 0.46
PTPN11-201ENST00000351677 ZYXQ15942 572 aaKnown RBP17.94■□□□□ 0.46
PTPN11-201ENST00000351677 TBC1D7Q9P0N9 293 aa17.94■□□□□ 0.46
PTPN11-201ENST00000351677 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
PTPN11-201ENST00000351677 JAKMIP2Q96AA8 810 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 CCDC77Q9BR77 488 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 XPO4Q9C0E2 1151 aaKnown RBP17.93■□□□□ 0.46
PTPN11-201ENST00000351677 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 ZNF274Q96GC6 653 aaPredicted RBP17.93■□□□□ 0.46
PTPN11-201ENST00000351677 YEATS2Q9ULM3 1422 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 ECM2O94769 699 aaPredicted RBP17.93■□□□□ 0.46
PTPN11-201ENST00000351677 DDX12PQ92771 950 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 LRWD1Q9UFC0 647 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 METP08581 1390 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 STAMBPO95630 424 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 PFKFB1P16118 471 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 NCAPH2Q6IBW4 605 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
PTPN11-201ENST00000351677 ARID4AP29374 1257 aaPredicted RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 MNAT1P51948 309 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 IPO4Q8TEX9 1081 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 NSRP1Q9H0G5 558 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 ADD1P35611 737 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 NBPF11Q86T75 865 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 ZNF654Q8IZM8 581 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 TLR7Q9NYK1 1049 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 LSG1Q9H089 658 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 IQCGQ9H095 443 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 CD2BP2O95400 341 aaKnown RBP17.92■□□□□ 0.46
PTPN11-201ENST00000351677 KRT9P35527 623 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 ADCY7P51828 1080 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 COMMD10Q9Y6G5 202 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 MYRIPQ8NFW9 859 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 SAMD9LQ8IVG5 1584 aa17.92■□□□□ 0.46
PTPN11-201ENST00000351677 PPP1R7Q15435 360 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 RASEFQ8IZ41 740 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 PFKFB2O60825 505 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 KRT5P13647 590 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 PPP2R5BQ15173 497 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 CFAP58Q5T655 872 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 KRT25Q7Z3Z0 450 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 SDR42E1Q8WUS8 393 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 UBLCP1Q8WVY7 318 aaPredicted RBP17.91■□□□□ 0.46
PTPN11-201ENST00000351677 TCP10Q12799 353 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 HAUS3Q68CZ6 603 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 MAEAQ7L5Y9 396 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
PTPN11-201ENST00000351677 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms