RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
APP-202ENST00000348990 FOXR1Q6PIV2 292 aa20.28■□□□□ 0.84
APP-202ENST00000348990 SRLQ86TD4 932 aa20.28■□□□□ 0.84
APP-202ENST00000348990 A1BGP04217 495 aa20.28■□□□□ 0.84
APP-202ENST00000348990 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
APP-202ENST00000348990 ADGRG1Q9Y653 693 aa20.28■□□□□ 0.84
APP-202ENST00000348990 SLIT1O75093 1534 aa20.28■□□□□ 0.84
APP-202ENST00000348990 IVLP07476 585 aa20.28■□□□□ 0.84
APP-202ENST00000348990 CASP14P31944 242 aa20.28■□□□□ 0.84
APP-202ENST00000348990 SLC20A2Q08357 652 aa20.28■□□□□ 0.84
APP-202ENST00000348990 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
APP-202ENST00000348990 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
APP-202ENST00000348990 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
APP-202ENST00000348990 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
APP-202ENST00000348990 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
APP-202ENST00000348990 TBX2Q13207 712 aaPredicted RBP20.27■□□□□ 0.84
APP-202ENST00000348990 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.84
APP-202ENST00000348990 NOSTRINQ8IVI9 506 aa20.27■□□□□ 0.84
APP-202ENST00000348990 ACBD3Q9H3P7 528 aa20.27■□□□□ 0.84
APP-202ENST00000348990 N4BP2Q86UW6 1770 aaPredicted RBP20.27■□□□□ 0.83
APP-202ENST00000348990 VSNL1P62760 191 aa20.26■□□□□ 0.83
APP-202ENST00000348990 METTL24Q5JXM2 366 aa20.26■□□□□ 0.83
APP-202ENST00000348990 UBXN6Q9BZV1 441 aa20.26■□□□□ 0.83
APP-202ENST00000348990 ANKZF1Q9H8Y5 726 aa20.26■□□□□ 0.83
APP-202ENST00000348990 AKAP2Q9Y2D5 859 aa20.26■□□□□ 0.83
APP-202ENST00000348990 MYO1BO43795 1136 aa20.26■□□□□ 0.83
APP-202ENST00000348990 PHKG2P15735 406 aa20.26■□□□□ 0.83
APP-202ENST00000348990 NR5A1Q13285 461 aa20.26■□□□□ 0.83
APP-202ENST00000348990 BEND6Q5SZJ8 279 aaPredicted RBP20.26■□□□□ 0.83
APP-202ENST00000348990 MAP3K14Q99558 947 aa20.26■□□□□ 0.83
APP-202ENST00000348990 GUCA1BQ9UMX6 200 aa20.26■□□□□ 0.83
APP-202ENST00000348990 N4BP3O15049 544 aa20.26■□□□□ 0.83
APP-202ENST00000348990 HINFPQ9BQA5 517 aa20.26■□□□□ 0.83
APP-202ENST00000348990 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
APP-202ENST00000348990 CASP8Q14790 479 aa20.25■□□□□ 0.83
APP-202ENST00000348990 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
APP-202ENST00000348990 H7C1W4 665 aa20.25■□□□□ 0.83
APP-202ENST00000348990 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
APP-202ENST00000348990 SLF1Q9BQI6 1058 aa20.25■□□□□ 0.83
APP-202ENST00000348990 VPS16Q9H269 839 aa20.25■□□□□ 0.83
APP-202ENST00000348990 PCDHB6Q9Y5E3 794 aa20.25■□□□□ 0.83
APP-202ENST00000348990 FOXP2O15409 715 aa20.25■□□□□ 0.83
APP-202ENST00000348990 AIDAQ96BJ3 306 aa20.25■□□□□ 0.83
APP-202ENST00000348990 NAPGQ99747 312 aaPredicted RBP20.25■□□□□ 0.83
APP-202ENST00000348990 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
APP-202ENST00000348990 GUCY1A2P33402 732 aa20.24■□□□□ 0.83
APP-202ENST00000348990 NCAPH2Q6IBW4 605 aa20.24■□□□□ 0.83
APP-202ENST00000348990 RABEP2Q9H5N1 569 aa20.24■□□□□ 0.83
APP-202ENST00000348990 GPR108Q9NPR9 543 aa20.24■□□□□ 0.83
APP-202ENST00000348990 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
APP-202ENST00000348990 CTDSPL2Q05D32 466 aa20.24■□□□□ 0.83
APP-202ENST00000348990 GTF2A1P52655 376 aaPredicted RBP20.23■□□□□ 0.83
APP-202ENST00000348990 FAM89AQ96GI7 184 aa20.23■□□□□ 0.83
APP-202ENST00000348990 CAPZA3Q96KX2 299 aa20.23■□□□□ 0.83
APP-202ENST00000348990 FAM204AQ9H8W3 233 aa20.23■□□□□ 0.83
APP-202ENST00000348990 RANBP6O60518 1105 aaKnown RBP20.23■□□□□ 0.83
APP-202ENST00000348990 CASP7P55210 303 aa20.23■□□□□ 0.83
APP-202ENST00000348990 NR1I3Q14994 352 aa20.23■□□□□ 0.83
APP-202ENST00000348990 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
APP-202ENST00000348990 UBN2Q6ZU65 1347 aa20.23■□□□□ 0.83
APP-202ENST00000348990 SYNRGQ9UMZ2 1314 aa20.23■□□□□ 0.83
APP-202ENST00000348990 ABL1P00519 1130 aa20.23■□□□□ 0.83
APP-202ENST00000348990 CDC25AP30304 524 aa20.23■□□□□ 0.83
APP-202ENST00000348990 PLCD1P51178 756 aa20.23■□□□□ 0.83
APP-202ENST00000348990 CSRNP2Q9H175 543 aa20.23■□□□□ 0.83
APP-202ENST00000348990 CNNM1Q9NRU3 951 aa20.23■□□□□ 0.83
APP-202ENST00000348990 ENC1O14682 589 aa20.22■□□□□ 0.83
APP-202ENST00000348990 MAP2K7O14733 419 aa20.22■□□□□ 0.83
APP-202ENST00000348990 NAPBQ9H115 298 aa20.22■□□□□ 0.83
APP-202ENST00000348990 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
APP-202ENST00000348990 ZMYND10O75800 440 aa20.22■□□□□ 0.83
APP-202ENST00000348990 ZNF18P17022 549 aa20.22■□□□□ 0.83
APP-202ENST00000348990 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
APP-202ENST00000348990 TTC31Q49AM3 519 aaPredicted RBP20.22■□□□□ 0.83
APP-202ENST00000348990 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.22■□□□□ 0.83
APP-202ENST00000348990 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
APP-202ENST00000348990 MAPK8IP1Q9UQF2 711 aa20.22■□□□□ 0.83
APP-202ENST00000348990 NOA1Q8NC60 698 aaKnown RBP20.21■□□□□ 0.83
APP-202ENST00000348990 CCDC148Q8NFR7 591 aa20.21■□□□□ 0.83
APP-202ENST00000348990 CAGE1Q8TC20 777 aa20.21■□□□□ 0.83
APP-202ENST00000348990 WASF1Q92558 559 aa20.21■□□□□ 0.83
APP-202ENST00000348990 PANX2Q96RD6 677 aa20.21■□□□□ 0.83
APP-202ENST00000348990 L1RE1Q9UN81 338 aa20.21■□□□□ 0.83
APP-202ENST00000348990 PIP4K2BP78356 416 aa20.21■□□□□ 0.83
APP-202ENST00000348990 LDHAL6AQ6ZMR3 332 aa20.21■□□□□ 0.83
APP-202ENST00000348990 ERICH2A1L162 156 aa20.21■□□□□ 0.83
APP-202ENST00000348990 MORC3Q14149 939 aa20.21■□□□□ 0.83
APP-202ENST00000348990 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
APP-202ENST00000348990 NBPF26B4DH59 902 aa20.2■□□□□ 0.82
APP-202ENST00000348990 NBPF14Q5TI25 921 aa20.2■□□□□ 0.82
APP-202ENST00000348990 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
APP-202ENST00000348990 NBPF10Q6P3W6 841 aaKnown RBP20.2■□□□□ 0.82
APP-202ENST00000348990 NBPF15Q8N660 670 aa20.2■□□□□ 0.82
APP-202ENST00000348990 SEC31BQ9NQW1 1179 aa20.2■□□□□ 0.82
APP-202ENST00000348990 PSD3Q9NYI0 1048 aa20.2■□□□□ 0.82
APP-202ENST00000348990 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
APP-202ENST00000348990 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
APP-202ENST00000348990 CNGA4Q8IV77 575 aa20.2■□□□□ 0.82
APP-202ENST00000348990 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
APP-202ENST00000348990 MDM2Q00987 491 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms