RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HLA-DOAP06340 250 aa21.66■■□□□ 1.06
CKLF-202ENST00000345436 CRACR2BQ8N4Y2 399 aaPredicted RBP21.66■■□□□ 1.06
CKLF-202ENST00000345436 TGFBRAP1Q8WUH2 860 aa21.66■■□□□ 1.06
CKLF-202ENST00000345436 ARMC5Q96C12 935 aa21.66■■□□□ 1.06
CKLF-202ENST00000345436 AS3MTQ9HBK9 375 aa21.66■■□□□ 1.06
CKLF-202ENST00000345436 FMNL1O95466 1100 aaPredicted RBP21.65■■□□□ 1.06
CKLF-202ENST00000345436 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.069e-11■■□□□ 12.1
CKLF-202ENST00000345436 PIH1D3Q9NQM4 214 aaKnown RBP21.65■■□□□ 1.06
CKLF-202ENST00000345436 GINM1Q9NU53 330 aa21.65■■□□□ 1.06
CKLF-202ENST00000345436 TLR7Q9NYK1 1049 aaKnown RBP21.65■■□□□ 1.06
CKLF-202ENST00000345436 CPA4Q9UI42 421 aa21.65■■□□□ 1.06
CKLF-202ENST00000345436 PNMA3Q9UL41 463 aa21.65■■□□□ 1.06
CKLF-202ENST00000345436 TRIM75PA6NK02 468 aa21.64■■□□□ 1.05
CKLF-202ENST00000345436 CAP2P40123 477 aa21.64■■□□□ 1.05
CKLF-202ENST00000345436 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
CKLF-202ENST00000345436 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 PSMC4P43686 418 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 USP5P45974 858 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 MOGSQ13724 837 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 GPAT2Q6NUI2 795 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 MAPKAPK5Q8IW41 473 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 ZNF280CQ8ND82 737 aa21.63■■□□□ 1.05
CKLF-202ENST00000345436 SMCR8Q8TEV9 937 aaPredicted RBP21.63■■□□□ 1.05
CKLF-202ENST00000345436 APBB1O00213 710 aa21.62■■□□□ 1.05
CKLF-202ENST00000345436 ASNSP08243 561 aa21.62■■□□□ 1.05
CKLF-202ENST00000345436 FCGRTP55899 365 aa21.62■■□□□ 1.05
CKLF-202ENST00000345436 MAGEB6Q8N7X4 407 aa21.62■■□□□ 1.05
CKLF-202ENST00000345436 PROCA1Q8NCQ7 364 aaPredicted RBP21.62■■□□□ 1.05
CKLF-202ENST00000345436 FLT1P17948 1338 aa21.61■■□□□ 1.05
CKLF-202ENST00000345436 SPP2Q13103 211 aa21.61■■□□□ 1.05
CKLF-202ENST00000345436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.61■■□□□ 1.05
CKLF-202ENST00000345436 AGTPBP1Q9UPW5 1226 aa21.61■■□□□ 1.05
CKLF-202ENST00000345436 PTCH2Q9Y6C5 1203 aa21.61■■□□□ 1.05
CKLF-202ENST00000345436 DOCK2Q92608 1830 aa21.61■■□□□ 1.05
CKLF-202ENST00000345436 FAM196BA6NMK8 535 aa21.6■■□□□ 1.05
CKLF-202ENST00000345436 OSBPP22059 807 aa21.6■■□□□ 1.05
CKLF-202ENST00000345436 SLC4A8Q2Y0W8 1093 aa21.6■■□□□ 1.05
CKLF-202ENST00000345436 TTC6Q86TZ1 520 aa21.6■■□□□ 1.05
CKLF-202ENST00000345436 RAET1EQ8TD07 263 aa21.6■■□□□ 1.05
CKLF-202ENST00000345436 CYP2C8P10632 490 aa21.59■■□□□ 1.05
CKLF-202ENST00000345436 ADGRA1Q86SQ6 560 aa21.59■■□□□ 1.05
CKLF-202ENST00000345436 TMOD4Q9NZQ9 345 aa21.59■■□□□ 1.05
CKLF-202ENST00000345436 SRRDQ9UH36 339 aa21.59■■□□□ 1.05
CKLF-202ENST00000345436 PALD1Q9ULE6 856 aa21.59■■□□□ 1.05
CKLF-202ENST00000345436 METTL16Q86W50 562 aaKnown RBP21.58■■□□□ 1.05
CKLF-202ENST00000345436 MIGA1Q8NAN2 632 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 ZNF333Q96JL9 665 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 TRIM47Q96LD4 638 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 WDR18Q9BV38 432 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 ARHGAP39Q9C0H5 1083 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 BCL11AQ9H165 835 aa21.58■■□□□ 1.05
CKLF-202ENST00000345436 ADGRA2Q96PE1 1338 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 MAGEB6P1A0A0J9YX57 407 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 C19orf81C9J6K1 198 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 SLURP2P0DP57 97 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 BCRP11274 1271 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 GCLCP48506 637 aaPredicted RBP21.57■■□□□ 1.04
CKLF-202ENST00000345436 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
CKLF-202ENST00000345436 SLC9C2Q5TAH2 1124 aa21.57■■□□□ 1.04
CKLF-202ENST00000345436 SAP30BPQ9UHR5 308 aaKnown RBP21.57■■□□□ 1.04
CKLF-202ENST00000345436 SIRT2Q8IXJ6 389 aa21.56■■□□□ 1.04
CKLF-202ENST00000345436 DNAJC2Q99543 621 aaKnown RBP21.56■■□□□ 1.04
CKLF-202ENST00000345436 CRNKL1Q9BZJ0 848 aaKnown RBP21.56■■□□□ 1.04
CKLF-202ENST00000345436 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.56■■□□□ 1.04
CKLF-202ENST00000345436 ANTXR1Q9H6X2 564 aa21.56■■□□□ 1.04
CKLF-202ENST00000345436 MYPNQ86TC9 1320 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 HMGCS2P54868 508 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 CAP1Q01518 475 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 SH3D19Q5HYK7 790 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 BIN2Q9UBW5 565 aaPredicted RBP21.55■■□□□ 1.04
CKLF-202ENST00000345436 SERPINB13Q9UIV8 391 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 NDUFB9Q9Y6M9 179 aa21.55■■□□□ 1.04
CKLF-202ENST00000345436 USP17L10C9JJH3 530 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 GOLIM4O00461 696 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 ECM2O94769 699 aaPredicted RBP21.54■■□□□ 1.04
CKLF-202ENST00000345436 GRK4P32298 578 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 BACE1P56817 501 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 UBXN2AP68543 259 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 CCDC84Q86UT8 332 aaPredicted RBP21.54■■□□□ 1.04
CKLF-202ENST00000345436 COA7Q96BR5 231 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 EHD4Q9H223 541 aa21.54■■□□□ 1.04
CKLF-202ENST00000345436 MAST2Q6P0Q8 1798 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 POTEFA5A3E0 1075 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 TNPO2O14787 897 aaKnown RBP21.53■■□□□ 1.04
CKLF-202ENST00000345436 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
CKLF-202ENST00000345436 PDE6AP16499 860 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 ATP5JP18859 108 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 IRX3P78415 501 aaPredicted RBP21.53■■□□□ 1.04
CKLF-202ENST00000345436 PRPF38BQ5VTL8 546 aaKnown RBP21.53■■□□□ 1.04
CKLF-202ENST00000345436 ZSCAN25Q6NSZ9 544 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 GPATCH3Q96I76 525 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 CABP5Q9NP86 173 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
CKLF-202ENST00000345436 DOCK1Q14185 1865 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 FAM110CQ1W6H9 321 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 ANKRD13CQ8N6S4 541 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 SLAIN1Q8ND83 568 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 NKX2-3Q8TAU0 364 aa21.52■■□□□ 1.04
CKLF-202ENST00000345436 SH3TC2Q8TF17 1288 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms