RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
RRP1B-201ENST00000340648 TTC14Q96N46 770 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 INCENPQ9NQS7 918 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 PCDHA5Q9Y5H7 936 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
RRP1B-201ENST00000340648 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 UNC13BO14795 1591 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 EXOC5O00471 708 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 FGAP02671 866 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 NOSTRINQ8IVI9 506 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 NELFBQ8WX92 580 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
RRP1B-201ENST00000340648 VPS54Q9P1Q0 977 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 METP08581 1390 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 ZPR1O75312 459 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 PDE4DQ08499 809 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
RRP1B-201ENST00000340648 UBE4AQ14139 1066 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 MCM9Q9NXL9 1143 aa16.67■□□□□ 0.26
RRP1B-201ENST00000340648 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 SMIM23A6NLE4 172 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 CPLX4Q7Z7G2 160 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
RRP1B-201ENST00000340648 SCLT1Q96NL6 688 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 SELENOSQ9BQE4 189 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 INPP5BP32019 993 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 LINC00301Q8NCQ3 95 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.269e-12■■■■■ 149.1
RRP1B-201ENST00000340648 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 MED14O60244 1454 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 STX10O60499 249 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 LRRC24Q50LG9 513 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 CCDC155Q8N6L0 562 aa16.66■□□□□ 0.26
RRP1B-201ENST00000340648 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
RRP1B-201ENST00000340648 LDHCP07864 332 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 TNNC1P63316 161 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 RABGGTAQ92696 567 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 MKRN1Q9UHC7 482 aaKnown RBP16.65■□□□□ 0.26
RRP1B-201ENST00000340648 TERF2Q15554 542 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 WHAMMP3Q1A5X7 153 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 TLDC2A0PJX2 215 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 ERCC3P19447 782 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 CETN2P41208 172 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
RRP1B-201ENST00000340648 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 TET3O43151 1660 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 USP27XA6NNY8 438 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 KRT79Q5XKE5 535 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
RRP1B-201ENST00000340648 SASH1O94885 1247 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 KRT13P13646 458 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 PLA2G4DQ86XP0 818 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 KCNF1Q9H3M0 494 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.26
RRP1B-201ENST00000340648 SAR1BQ9Y6B6 198 aa16.64■□□□□ 0.26
RRP1B-201ENST00000340648 TBCAO75347 108 aaKnown RBP16.64■□□□□ 0.25
RRP1B-201ENST00000340648 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
RRP1B-201ENST00000340648 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 UBLCP1Q8WVY7 318 aaPredicted RBP16.64■□□□□ 0.25
RRP1B-201ENST00000340648 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
RRP1B-201ENST00000340648 LONRF2Q1L5Z9 754 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 GBP6Q6ZN66 633 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
RRP1B-201ENST00000340648 IKBKBO14920 756 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 CETN1Q12798 172 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 B4GALNT4Q76KP1 1039 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 EZRP15311 586 aaKnown RBP16.63■□□□□ 0.25
RRP1B-201ENST00000340648 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 GOLGA5Q8TBA6 731 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 TNNI2P48788 182 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 PLCD1P51178 756 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 ORAI2Q96SN7 254 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 PLEKHA4Q9H4M7 779 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
RRP1B-201ENST00000340648 SARM1Q6SZW1 724 aa16.63■□□□□ 0.25
RRP1B-201ENST00000340648 RAPGEF1Q13905 1077 aa16.62■□□□□ 0.25
RRP1B-201ENST00000340648 ZMYM1Q5SVZ6 1142 aa16.62■□□□□ 0.25
RRP1B-201ENST00000340648 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
RRP1B-201ENST00000340648 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
RRP1B-201ENST00000340648 COBLO75128 1261 aa16.62■□□□□ 0.25
RRP1B-201ENST00000340648 ANKS4BQ8N8V4 417 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms