RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FBXW4P57775 412 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 NOX5Q96PH1 765 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 BCAP29Q9UHQ4 241 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 GNGT2O14610 69 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 ABTB1Q969K4 478 aaPredicted RBP18.19■□□□□ 0.5
PTCH1-201ENST00000331920 APOBRQ0VD83 1088 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 PICK1Q9NRD5 415 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 CUX1P39880 1505 aa18.19■□□□□ 0.5
PTCH1-201ENST00000331920 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 RASSF2P50749 326 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 ZBTB17Q13105 803 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 MCMDC2Q4G0Z9 681 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
PTCH1-201ENST00000331920 RIPOR2Q9Y4F9 1068 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 NPR1P16066 1061 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 CEP104O60308 925 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 GNA11P29992 359 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 IRX4P78413 519 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 ANXA1P04083 346 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 BLVRAP53004 296 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 PDE4DQ08499 809 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 ACBD5Q5T8D3 534 aaPredicted RBP18.18■□□□□ 0.5
PTCH1-201ENST00000331920 SCYL2Q6P3W7 929 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 TRIM4Q9C037 500 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
PTCH1-201ENST00000331920 ST7Q9NRC1 585 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 NKTRP30414 1462 aaKnown RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 KLHL40Q2TBA0 621 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 GDAP1L1Q96MZ0 367 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 ORC6Q9Y5N6 252 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 RNF169Q8NCN4 708 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 ZRANB2O95218 330 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 TAB3Q8N5C8 712 aaPredicted RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 IGSF22Q8N9C0 903 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 PARP1P09874 1014 aaKnown RBP18.17■□□□□ 0.5
PTCH1-201ENST00000331920 CD19P15391 556 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 RMDN2Q96LZ7 410 aa18.17■□□□□ 0.5
PTCH1-201ENST00000331920 GCNT3O95395 438 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 ANKRD50Q9ULJ7 1429 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 SLC9A5Q14940 896 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 PTPROQ16827 1216 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 NUDCD3Q8IVD9 361 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 KIF9Q9HAQ2 790 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 HMGB1P1B2RPK0 211 aaPredicted RBP18.16■□□□□ 0.5
PTCH1-201ENST00000331920 SORBS3O60504 671 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 SLC4A1P02730 911 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 TROVE2P10155 538 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTCH1-201ENST00000331920 STX2P32856 288 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 TMED1Q13445 227 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 ZRANB1Q9UGI0 708 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 MAGED2Q9UNF1 606 aaPredicted RBP18.16■□□□□ 0.5
PTCH1-201ENST00000331920 M0QZ92 97 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 GUCY2FP51841 1108 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 CYP26C1Q6V0L0 522 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 Q9H521 79 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 A0A1B0GVL5 298 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 DNAJC8O75937 253 aaPredicted RBP18.16■□□□□ 0.5
PTCH1-201ENST00000331920 ECE1P42892 770 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 TMOD4Q9NZQ9 345 aa18.16■□□□□ 0.5
PTCH1-201ENST00000331920 SPDYE1Q8NFV5 336 aaPredicted RBP18.15■□□□□ 0.5
PTCH1-201ENST00000331920 LRMPQ12912 555 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 PTPRCP08575 1304 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 ARHGAP4P98171 946 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 USH1GQ495M9 461 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 MYLK4Q86YV6 388 aaPredicted RBP18.15■□□□□ 0.5
PTCH1-201ENST00000331920 METTL14Q9HCE5 456 aaKnown RBP18.15■□□□□ 0.5
PTCH1-201ENST00000331920 FGD4Q96M96 766 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 VWA3BQ502W6 1294 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 METTL13Q8N6R0 699 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 STAG1Q8WVM7 1258 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 SYNJ2BP-COX16A0A087WUM0 186 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 NVLO15381 856 aaKnown RBP18.15■□□□□ 0.5
PTCH1-201ENST00000331920 PPWD1Q96BP3 646 aaKnown RBP18.15■□□□□ 0.5
PTCH1-201ENST00000331920 KRT82Q9NSB4 513 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 COX16Q9P0S2 106 aa18.15■□□□□ 0.5
PTCH1-201ENST00000331920 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.5
PTCH1-201ENST00000331920 BRDTQ58F21 947 aaPredicted RBP18.14■□□□□ 0.5
PTCH1-201ENST00000331920 ARHGAP25P42331 645 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
PTCH1-201ENST00000331920 PRKG1Q13976 671 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 RAPH1Q70E73 1250 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms