RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 GLI3P10071 1580 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 CCP110O43303 1012 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 PYGBP11216 843 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 MAGEA8P43361 318 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 ETF1P62495 437 aaKnown RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 HHATQ5VTY9 493 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 ZKSCAN4Q969J2 545 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 CHCHD3Q9NX63 227 aaKnown RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 TLR7Q9NYK1 1049 aaKnown RBP11.74□□□□□ -0.53
SF3B2-201ENST00000322535 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 PDE1AP54750 535 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 ARL10Q8N8L6 244 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
SF3B2-201ENST00000322535 ATP8B1O43520 1251 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 SFPQP23246 707 aaKnown RBP eCLIP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 CD151P48509 253 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 APOBRQ0VD83 1088 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 INTS5Q6P9B9 1019 aaKnown RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 CWC25Q9NXE8 425 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 RAB27AP51159 221 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 POLA2Q14181 598 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■■■ 40.3
SF3B2-201ENST00000322535 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 ENO4A6NNW6 628 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 PECAM1P16284 738 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 SETDB1Q15047 1291 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
SF3B2-201ENST00000322535 CRACR2AQ9BSW2 395 aa11.73□□□□□ -0.53
SF3B2-201ENST00000322535 SASH1O94885 1247 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 TRIM37O94972 964 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 CDC25BP30305 580 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 AOPEPQ8N6M6 819 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
SF3B2-201ENST00000322535 RUFY3Q7L099 469 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 AACSQ86V21 672 aa11.72□□□□□ -0.53
SF3B2-201ENST00000322535 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
SF3B2-201ENST00000322535 FANCGO15287 622 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 NAT1P18440 290 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 RDXP35241 583 aaKnown RBP11.71□□□□□ -0.53
SF3B2-201ENST00000322535 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.53
SF3B2-201ENST00000322535 ICA1Q05084 483 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■□□ 17
SF3B2-201ENST00000322535 TCIRG1Q13488 830 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
SF3B2-201ENST00000322535 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.53
SF3B2-201ENST00000322535 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 CLSTN2Q9H4D0 955 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 LIMCH1Q9UPQ0 1083 aa11.71□□□□□ -0.53
SF3B2-201ENST00000322535 NRDCO43847 1150 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 CCT5P48643 541 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 PREPLQ4J6C6 727 aaPredicted RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 LRRC24Q50LG9 513 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 SPDYE1Q8NFV5 336 aaPredicted RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 MKL1Q969V6 931 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 IL25Q9H293 177 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 TRMT112Q9UI30 125 aaKnown RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 TRPC5Q9UL62 973 aaPredicted RBP11.71□□□□□ -0.54
SF3B2-201ENST00000322535 PXDNLA1KZ92 1463 aa11.71□□□□□ -0.54
SF3B2-201ENST00000322535 CLNS1AP54105 237 aaKnown RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 GNG11P61952 73 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 IQCB1Q15051 598 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 PDCD2Q16342 344 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 ARMCX5Q6P1M9 558 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
SF3B2-201ENST00000322535 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 MAP3K15Q6ZN16 1313 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 CHGBP05060 677 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 CASP7P55210 303 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 FOXO4P98177 505 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 TFCP2Q12800 502 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 IQCA1Q86XH1 822 aa11.7□□□□□ -0.54
SF3B2-201ENST00000322535 UTP14AQ9BVJ6 771 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms