RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
COL6A2-202ENST00000310645 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
COL6A2-202ENST00000310645 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 CDKL5O76039 1030 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 CASP14P31944 242 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 NR1I3Q14994 352 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 SMYD4Q8IYR2 804 aaPredicted RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 DACH1Q9UI36 760 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 ZBTB43O43298 467 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 MYO1BO43795 1136 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 LTN1O94822 1766 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 CASP7P55210 303 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 MDM2Q00987 491 aaPredicted RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 APOA5Q6Q788 366 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
COL6A2-202ENST00000310645 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
COL6A2-202ENST00000310645 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
COL6A2-202ENST00000310645 TTC31Q49AM3 519 aaPredicted RBP16.7■□□□□ 0.26
COL6A2-202ENST00000310645 XAGE2Q96GT9 111 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 FBXL16Q8N461 479 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 PACS2Q86VP3 889 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 ARHGEF25Q86VW2 580 aa16.7■□□□□ 0.26
COL6A2-202ENST00000310645 HNRNPLLQ8WVV9 542 aaKnown RBP16.7■□□□□ 0.26
COL6A2-202ENST00000310645 LRRIQ3A6PVS8 624 aaPredicted RBP16.69■□□□□ 0.26
COL6A2-202ENST00000310645 RANBP6O60518 1105 aaKnown RBP16.69■□□□□ 0.26
COL6A2-202ENST00000310645 APPBP2Q92624 585 aa16.69■□□□□ 0.26
COL6A2-202ENST00000310645 HINFPQ9BQA5 517 aa16.69■□□□□ 0.26
COL6A2-202ENST00000310645 CDC25AP30304 524 aa16.69■□□□□ 0.26
COL6A2-202ENST00000310645 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL6A2-202ENST00000310645 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
COL6A2-202ENST00000310645 STAMQ92783 540 aa16.69■□□□□ 0.26
COL6A2-202ENST00000310645 GUCY1A2P33402 732 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 MORC3Q14149 939 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 LRRC31Q6UY01 552 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 PANX2Q96RD6 677 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 RABEP2Q9H5N1 569 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 RAB21Q9UL25 225 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 SSRP1Q08945 709 aaKnown RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 NR5A1Q13285 461 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 LRP10Q7Z4F1 713 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 DRC1Q96MC2 740 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 PCDHB6Q9Y5E3 794 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 A0A1B0GTH6 734 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 ZMYND10O75800 440 aa16.68■□□□□ 0.26
COL6A2-202ENST00000310645 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 RIN2Q8WYP3 895 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-202ENST00000310645 ENC1O14682 589 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 PLEKHG2Q9H7P9 1386 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 H7C1W4 665 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 SH2B2O14492 632 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-202ENST00000310645 MAGEA9P43362 315 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 USP5P45974 858 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-202ENST00000310645 PLCD1P51178 756 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 ICE2Q659A1 982 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-202ENST00000310645 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 FAM71BQ8TC56 605 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
COL6A2-202ENST00000310645 RNF40O75150 1001 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
COL6A2-202ENST00000310645 GBP3Q9H0R5 595 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 VPS16Q9H269 839 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
COL6A2-202ENST00000310645 MFAP3LO75121 409 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 CD44P16070 742 aaKnown RBP16.66■□□□□ 0.26
COL6A2-202ENST00000310645 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 FBXO2Q9UK22 296 aaPredicted RBP16.66■□□□□ 0.26
COL6A2-202ENST00000310645 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
COL6A2-202ENST00000310645 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms