RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
CASC4-201ENST00000299957 GOLGA6L9A6NEM1 432 aa15.07■□□□□ 0
CASC4-201ENST00000299957 KIF28PB7ZC32 967 aa15.07■□□□□ 0
CASC4-201ENST00000299957 C6orf229H3BNL8 230 aa15.07■□□□□ 0
CASC4-201ENST00000299957 EPSTI1Q96J88 318 aa15.07■□□□□ 0
CASC4-201ENST00000299957 CDC5LQ99459 802 aaKnown RBP15.07■□□□□ 0
CASC4-201ENST00000299957 USP17L12C9JPN9 530 aa15.07■□□□□ 0
CASC4-201ENST00000299957 USP17L21D6R901 530 aa15.07■□□□□ 0
CASC4-201ENST00000299957 PRPF4BQ13523 1007 aaKnown RBP15.07■□□□□ 0
CASC4-201ENST00000299957 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
CASC4-201ENST00000299957 ATL3Q6DD88 541 aa15.07■□□□□ 0
CASC4-201ENST00000299957 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
CASC4-201ENST00000299957 ANKRD13CQ8N6S4 541 aa15.07■□□□□ 0
CASC4-201ENST00000299957 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
CASC4-201ENST00000299957 LUC7L2Q9Y383 392 aaKnown RBP15.07■□□□□ 0
CASC4-201ENST00000299957 PCDHB6Q9Y5E3 794 aa15.07■□□□□ 0
CASC4-201ENST00000299957 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
CASC4-201ENST00000299957 SLC39A14Q15043 492 aa15.06■□□□□ 0
CASC4-201ENST00000299957 CCDC40Q4G0X9 1142 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SENP2Q9HC62 589 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SYNRGQ9UMZ2 1314 aa15.06■□□□□ 0
CASC4-201ENST00000299957 CD163L1Q9NR16 1453 aa15.06■□□□□ 0
CASC4-201ENST00000299957 CFAP74Q9C0B2 1584 aa15.06■□□□□ 0
CASC4-201ENST00000299957 TSPY3P0CV98 308 aa15.06■□□□□ 0
CASC4-201ENST00000299957 TSPY8P0CW00 308 aa15.06■□□□□ 0
CASC4-201ENST00000299957 CLCN6P51797 869 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SMC1AQ14683 1233 aaKnown RBP15.06■□□□□ 0
CASC4-201ENST00000299957 IQUBQ8NA54 791 aa15.06■□□□□ 0
CASC4-201ENST00000299957 GPKOWQ92917 476 aaPredicted RBP eCLIP15.06■□□□□ 0
CASC4-201ENST00000299957 CCDC113Q9H0I3 377 aa15.06■□□□□ 0
CASC4-201ENST00000299957 ZBTB1Q9Y2K1 713 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
CASC4-201ENST00000299957 HECW2Q9P2P5 1572 aa15.06■□□□□ 0
CASC4-201ENST00000299957 SOWAHDA6NJG2 315 aa15.06■□□□□ 0
CASC4-201ENST00000299957 ZEB2O60315 1214 aa15.06■□□□□ 0
CASC4-201ENST00000299957 KIF20AO95235 890 aa15.06■□□□□ 0
CASC4-201ENST00000299957 PDE4BQ07343 736 aa15.06■□□□□ 0
CASC4-201ENST00000299957 IPO4Q8TEX9 1081 aaKnown RBP15.06■□□□□ 0
CASC4-201ENST00000299957 CSRNP2Q9H175 543 aa15.06■□□□□ 0
CASC4-201ENST00000299957 PIH1D3Q9NQM4 214 aaKnown RBP15.06■□□□□ 0
CASC4-201ENST00000299957 TCEAL9Q9UHQ7 104 aa15.06■□□□□ 0
CASC4-201ENST00000299957 PUM3Q15397 648 aaKnown RBP15.05■□□□□ 0
CASC4-201ENST00000299957 HLFQ16534 295 aa15.05■□□□□ 0
CASC4-201ENST00000299957 PLA2G4DQ86XP0 818 aa15.05■□□□□ 0
CASC4-201ENST00000299957 TMEM87BQ96K49 555 aa15.05■□□□□ 0
CASC4-201ENST00000299957 BAZ2BQ9UIF8 2168 aaKnown RBP15.05■□□□□ 0
CASC4-201ENST00000299957 DEXIO95424 95 aa15.05■□□□□ -0
CASC4-201ENST00000299957 GOLGA8HP0CJ92 632 aa15.05■□□□□ -0
CASC4-201ENST00000299957 NAPAP54920 295 aa15.05■□□□□ -0
CASC4-201ENST00000299957 RNF187Q5TA31 235 aaPredicted RBP15.05■□□□□ -0
CASC4-201ENST00000299957 NBPF5PQ86XG9 351 aaPredicted RBP15.05■□□□□ -0
CASC4-201ENST00000299957 EXOC1Q9NV70 894 aa15.05■□□□□ -0
CASC4-201ENST00000299957 IMPACTQ9P2X3 320 aa15.05■□□□□ -0
CASC4-201ENST00000299957 MCAMP43121 646 aa15.05■□□□□ -0
CASC4-201ENST00000299957 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
CASC4-201ENST00000299957 IFT81Q8WYA0 676 aa15.05■□□□□ -0
CASC4-201ENST00000299957 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
CASC4-201ENST00000299957 NBPF26B4DH59 902 aa15.04■□□□□ -0
CASC4-201ENST00000299957 PAFAH1B1P43034 410 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
CASC4-201ENST00000299957 NBPF14Q5TI25 921 aa15.04■□□□□ -0
CASC4-201ENST00000299957 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
CASC4-201ENST00000299957 SMIM5Q71RC9 77 aa15.04■□□□□ -0
CASC4-201ENST00000299957 DYMQ7RTS9 669 aa15.04■□□□□ -0
CASC4-201ENST00000299957 NBPF15Q8N660 670 aa15.04■□□□□ -0
CASC4-201ENST00000299957 CCDC42Q96M95 316 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TEX13AQ9BXU3 409 aaPredicted RBP15.04■□□□□ -0
CASC4-201ENST00000299957 GBP3Q9H0R5 595 aa15.04■□□□□ -0
CASC4-201ENST00000299957 SH3TC1Q8TE82 1336 aa15.04■□□□□ -0
CASC4-201ENST00000299957 PSMA7O14818 248 aa15.04■□□□□ -0
CASC4-201ENST00000299957 CDC27P30260 824 aa15.04■□□□□ -0
CASC4-201ENST00000299957 CASP14P31944 242 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TTC38Q5R3I4 469 aa15.04■□□□□ -0
CASC4-201ENST00000299957 CYB5R4Q7L1T6 521 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TMTC2Q8N394 836 aa15.04■□□□□ -0
CASC4-201ENST00000299957 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TBC1D7Q9P0N9 293 aa15.04■□□□□ -0
CASC4-201ENST00000299957 TNKSO95271 1327 aa15.04■□□□□ -0
CASC4-201ENST00000299957 IQCB1Q15051 598 aa15.04■□□□□ -0
CASC4-201ENST00000299957 FMR1NBQ8N0W7 255 aaPredicted RBP15.04■□□□□ -0
CASC4-201ENST00000299957 FANCBQ8NB91 859 aa15.04■□□□□ -0
CASC4-201ENST00000299957 CTDNEP1O95476 244 aa15.03■□□□□ -0
CASC4-201ENST00000299957 TNNI2P48788 182 aa15.03■□□□□ -0
CASC4-201ENST00000299957 MTF1Q14872 753 aa15.03■□□□□ -0
CASC4-201ENST00000299957 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
CASC4-201ENST00000299957 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
CASC4-201ENST00000299957 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
CASC4-201ENST00000299957 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
CASC4-201ENST00000299957 KIAA0754O94854 1291 aa15.03■□□□□ -0
CASC4-201ENST00000299957 KIF5BP33176 963 aa15.03■□□□□ -0
CASC4-201ENST00000299957 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
CASC4-201ENST00000299957 ARMCX5Q6P1M9 558 aa15.03■□□□□ -0
CASC4-201ENST00000299957 DHX40Q8IX18 779 aaKnown RBP15.03■□□□□ -0
CASC4-201ENST00000299957 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
CASC4-201ENST00000299957 MLKLQ8NB16 471 aa15.03■□□□□ -0
CASC4-201ENST00000299957 USO1O60763 962 aaKnown RBP15.02■□□□□ -0
CASC4-201ENST00000299957 PTGDRQ13258 359 aa15.02■□□□□ -0
CASC4-201ENST00000299957 DTHD1Q6ZMT9 781 aa15.02■□□□□ -0
CASC4-201ENST00000299957 USP49Q70CQ1 688 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms