RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
IDH3A-201ENST00000299518 YEATS4O95619 227 aa12.9□□□□□ -0.35
IDH3A-201ENST00000299518 BRAPQ7Z569 592 aa12.9□□□□□ -0.35
IDH3A-201ENST00000299518 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.35
IDH3A-201ENST00000299518 XPO4Q9C0E2 1151 aaKnown RBP12.9□□□□□ -0.35
IDH3A-201ENST00000299518 ANO10Q9NW15 660 aa12.9□□□□□ -0.35
IDH3A-201ENST00000299518 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-201ENST00000299518 MECOMQ03112 1051 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 STAMQ92783 540 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 BMP6P22004 513 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 TRIM29Q14134 588 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 NFIXQ14938 502 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 FANCBQ8NB91 859 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 PDE4BQ07343 736 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 ALX1Q15699 326 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 METTL16Q86W50 562 aaKnown RBP12.89□□□□□ -0.35
IDH3A-201ENST00000299518 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
IDH3A-201ENST00000299518 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
IDH3A-201ENST00000299518 PCNTO95613 3336 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 LRRC8AQ8IWT6 810 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 LRP5O75197 1615 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 LIFRP42702 1097 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 CPLX2Q6PUV4 134 aaKnown RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 CRACR2BQ8N4Y2 399 aaPredicted RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 CMA1P23946 247 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 TRMT44Q8IYL2 757 aaKnown RBP12.88□□□□□ -0.35
IDH3A-201ENST00000299518 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
IDH3A-201ENST00000299518 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 NCAPHQ15003 741 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 ARHGEF1Q92888 912 aaKnown RBP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 DYNLL2Q96FJ2 89 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 ERICH2A1L162 156 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 CTAGE5O15320 804 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 POLR2DO15514 142 aaKnown RBP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 MMP1P03956 469 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 KRT23Q9C075 422 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
IDH3A-201ENST00000299518 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 CDKL5O76039 1030 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 SKILP12757 684 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 IFNAR1P17181 557 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 ZNF804BA4D1E1 1349 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
IDH3A-201ENST00000299518 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 SEC23AQ15436 765 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 TICAM2Q86XR7 235 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 NSUN4Q96CB9 384 aaKnown RBP12.86□□□□□ -0.35
IDH3A-201ENST00000299518 KCNH3Q9ULD8 1083 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
IDH3A-201ENST00000299518 ATL3Q6DD88 541 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
IDH3A-201ENST00000299518 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 CDC25AP30304 524 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 TPD52L1Q16890 204 aaPredicted RBP12.86□□□□□ -0.35
IDH3A-201ENST00000299518 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 A0A087X0B3 334 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 PKN1Q16512 942 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 AK7Q96M32 723 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
IDH3A-201ENST00000299518 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 SERTAD1Q9UHV2 236 aa12.86□□□□□ -0.35
IDH3A-201ENST00000299518 ZPR1O75312 459 aa12.85□□□□□ -0.35
IDH3A-201ENST00000299518 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
IDH3A-201ENST00000299518 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
IDH3A-201ENST00000299518 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
IDH3A-201ENST00000299518 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
IDH3A-201ENST00000299518 TNNT1P13805 278 aa12.85□□□□□ -0.35
IDH3A-201ENST00000299518 SART3Q15020 963 aaKnown RBP12.85□□□□□ -0.35
IDH3A-201ENST00000299518 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
IDH3A-201ENST00000299518 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
IDH3A-201ENST00000299518 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
IDH3A-201ENST00000299518 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms