RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PDE4BQ07343 736 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 HHIPL2Q6UWX4 724 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 FAM184AQ8NB25 1140 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 SGIP1Q9BQI5 828 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 SAP30BPQ9UHR5 308 aaKnown RBP26.78■■□□□ 1.88
PTX3-201ENST00000295927 FLT1P17948 1338 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 PSME4Q14997 1843 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 ROBO3Q96MS0 1386 aa26.78■■□□□ 1.88
PTX3-201ENST00000295927 PSDA5PKW4 1024 aaPredicted RBP26.77■■□□□ 1.88
PTX3-201ENST00000295927 ZBTB43O43298 467 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 PTMSP20962 102 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 METAP2P50579 478 aaKnown RBP eCLIP26.77■■□□□ 1.88
PTX3-201ENST00000295927 TMTC2Q8N394 836 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 TEKT1Q969V4 418 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 SLC12A7Q9Y666 1083 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 TNKSO95271 1327 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 YDJCA8MPS7 323 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 POLR3DP05423 398 aaPredicted RBP26.77■■□□□ 1.88
PTX3-201ENST00000295927 RXRAP19793 462 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 SEC23AQ15436 765 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 SOGA3Q5TF21 947 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 MICU3Q86XE3 530 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 KIAA0825Q8IV33 1275 aa26.77■■□□□ 1.88
PTX3-201ENST00000295927 ZSCAN10Q96SZ4 725 aaPredicted RBP26.77■■□□□ 1.88
PTX3-201ENST00000295927 PPP1R1BQ9UD71 204 aaPredicted RBP26.77■■□□□ 1.88
PTX3-201ENST00000295927 TCHHQ07283 1943 aa26.76■■□□□ 1.87
PTX3-201ENST00000295927 PLCD1P51178 756 aa26.76■■□□□ 1.87
PTX3-201ENST00000295927 CDC37L1Q7L3B6 337 aa26.76■■□□□ 1.87
PTX3-201ENST00000295927 ECM29Q5VYK3 1845 aa26.76■■□□□ 1.87
PTX3-201ENST00000295927 TRAK2O60296 914 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 PPFIA3O75145 1194 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 CRKP46108 304 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 FOXD4L6Q3SYB3 417 aaPredicted RBP26.75■■□□□ 1.87
PTX3-201ENST00000295927 FOXD4L3Q6VB84 417 aaPredicted RBP26.75■■□□□ 1.87
PTX3-201ENST00000295927 DYNLL2Q96FJ2 89 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 MYL10Q9BUA6 226 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 ZNF277Q9NRM2 450 aaPredicted RBP26.75■■□□□ 1.87
PTX3-201ENST00000295927 CPLX1O14810 134 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 DALRD3Q5D0E6 543 aaKnown RBP26.75■■□□□ 1.87
PTX3-201ENST00000295927 SYNE3Q6ZMZ3 975 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 IQCA1Q86XH1 822 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 MRIQ9BWK5 157 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 KIF3AQ9Y496 699 aa26.75■■□□□ 1.87
PTX3-201ENST00000295927 FDPSP14324 419 aaKnown RBP26.74■■□□□ 1.87
PTX3-201ENST00000295927 ADD1P35611 737 aaKnown RBP26.74■■□□□ 1.87
PTX3-201ENST00000295927 ENAHQ8N8S7 591 aaPredicted RBP26.74■■□□□ 1.87
PTX3-201ENST00000295927 USP40Q9NVE5 1235 aa26.74■■□□□ 1.87
PTX3-201ENST00000295927 GOLGA8AA7E2F4 631 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 CDC27P30260 824 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 FAM47AQ5JRC9 791 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 APOBEC3HQ6NTF7 200 aaKnown RBP26.73■■□□□ 1.87
PTX3-201ENST00000295927 CCDC144CPQ8IYA2 1237 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 LARGE2Q8N3Y3 721 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 COL4A5P29400 1685 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 HDLBPQ00341 1268 aaKnown RBP26.73■■□□□ 1.87
PTX3-201ENST00000295927 ZDHHC15Q96MV8 337 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 ATP6V1DQ9Y5K8 247 aa26.73■■□□□ 1.87
PTX3-201ENST00000295927 NID2Q14112 1375 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 GOLGB1Q14789 3259 aaKnown RBP26.72■■□□□ 1.87
PTX3-201ENST00000295927 WDHD1O75717 1129 aaPredicted RBP26.72■■□□□ 1.87
PTX3-201ENST00000295927 CDC42EP5Q6NZY7 148 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 KLHL34Q8N239 644 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 VPS33BQ9H267 617 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 FAM217BQ9NTX9 383 aaPredicted RBP26.72■■□□□ 1.87
PTX3-201ENST00000295927 LMBRD1Q9NUN5 540 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 CD2APQ9Y5K6 639 aa26.72■■□□□ 1.87
PTX3-201ENST00000295927 PTGER2P43116 358 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 PICALMQ13492 652 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 FER1L6Q2WGJ9 1857 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 TSPY2A6NKD2 308 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 H3BQV1 296 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 NT5C2P49902 561 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 IFFO2Q5TF58 517 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 ZNF654Q8IZM8 581 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 MKNK2Q9HBH9 465 aa26.71■■□□□ 1.87
PTX3-201ENST00000295927 PRPF40AO75400 957 aaKnown RBP26.7■■□□□ 1.86
PTX3-201ENST00000295927 IFIT1BQ5T764 474 aaKnown RBP26.7■■□□□ 1.86
PTX3-201ENST00000295927 FERMT3Q86UX7 667 aa26.7■■□□□ 1.86
PTX3-201ENST00000295927 SLC44A5Q8NCS7 719 aa26.7■■□□□ 1.86
PTX3-201ENST00000295927 DDX4Q9NQI0 724 aaKnown RBP26.7■■□□□ 1.86
PTX3-201ENST00000295927 ORC3Q9UBD5 711 aaPredicted RBP26.7■■□□□ 1.86
PTX3-201ENST00000295927 RCAN1P53805 252 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 CPLX2Q6PUV4 134 aaKnown RBP26.69■■□□□ 1.86
PTX3-201ENST00000295927 NMT2O60551 498 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 CDKL5O76039 1030 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 FOSBP53539 338 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 TFAP4Q01664 338 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 NTRK3Q16288 839 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 SKOR2Q2VWA4 1001 aaPredicted RBP26.69■■□□□ 1.86
PTX3-201ENST00000295927 C16orf86Q6ZW13 317 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 SERPINA10Q9UK55 444 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 PCDHAC2Q9Y5I4 1007 aa26.69■■□□□ 1.86
PTX3-201ENST00000295927 IARSP41252 1262 aaKnown RBP26.67■■□□□ 1.86
PTX3-201ENST00000295927 RBM5P52756 815 aaKnown RBP eCLIP26.67■■□□□ 1.86
PTX3-201ENST00000295927 RTN1Q16799 776 aa26.67■■□□□ 1.86
PTX3-201ENST00000295927 ZNF287Q9HBT7 754 aa26.67■■□□□ 1.86
PTX3-201ENST00000295927 RAD17O75943 681 aa26.67■■□□□ 1.86
PTX3-201ENST00000295927 CDK8P49336 464 aa26.67■■□□□ 1.86
PTX3-201ENST00000295927 ZNF444Q8N0Y2 327 aaPredicted RBP26.67■■□□□ 1.86
PTX3-201ENST00000295927 NUP133Q8WUM0 1156 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms