RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DKC1O60832 514 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHANK1-201ENST00000293441 OTUD7BQ6GQQ9 843 aa19.36■□□□□ 0.69
SHANK1-201ENST00000293441 TTF2Q9UNY4 1162 aaKnown RBP19.35■□□□□ 0.69
SHANK1-201ENST00000293441 SNX29Q8TEQ0 813 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 SEC24BO95487 1268 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 CALCRLQ16602 461 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 KCNH3Q9ULD8 1083 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 AKR1B15C9JRZ8 316 aaPredicted RBP19.35■□□□□ 0.69
SHANK1-201ENST00000293441 DIS3L2Q8IYB7 885 aaKnown RBP19.35■□□□□ 0.69
SHANK1-201ENST00000293441 OPA1O60313 960 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 GAS8O95995 478 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 FAM160A1Q05DH4 1040 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 RAD51AP2Q09MP3 1159 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 RASA3Q14644 834 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 CDAN1Q8IWY9 1227 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 MTUS1Q9ULD2 1270 aa19.35■□□□□ 0.69
SHANK1-201ENST00000293441 ERVV-2B6SEH9 535 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 ATP2A2P16615 1042 aaKnown RBP19.34■□□□□ 0.69
SHANK1-201ENST00000293441 EIF4A1P60842 406 aaKnown RBP19.34■□□□□ 0.69
SHANK1-201ENST00000293441 TFAP4Q01664 338 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 CFAP58Q5T655 872 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 SMCR8Q8TEV9 937 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-201ENST00000293441 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
SHANK1-201ENST00000293441 CCDC14Q49A88 953 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 DYMQ7RTS9 669 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 NONOQ15233 471 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHANK1-201ENST00000293441 GPR162Q16538 588 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 RHOXF2BP0C7M4 288 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 PPP1R2P41236 205 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 CNGA4Q8IV77 575 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 MYCT1Q8N699 235 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 RHOXF2Q9BQY4 288 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
SHANK1-201ENST00000293441 SPOPO43791 374 aa19.33■□□□□ 0.69
SHANK1-201ENST00000293441 FMNL3Q8IVF7 1028 aa19.33■□□□□ 0.69
SHANK1-201ENST00000293441 NEURL1BA8MQ27 555 aa19.33■□□□□ 0.69
SHANK1-201ENST00000293441 TBC1D22AQ8WUA7 517 aa19.33■□□□□ 0.69
SHANK1-201ENST00000293441 LLPHQ9BRT6 129 aaKnown RBP19.33■□□□□ 0.69
SHANK1-201ENST00000293441 DNM3Q9UQ16 869 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 ZBTB16Q05516 673 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 ATRIPQ8WXE1 791 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 SNX16P57768 344 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 ASIC2Q16515 512 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 KRT25Q7Z3Z0 450 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.68
SHANK1-201ENST00000293441 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
SHANK1-201ENST00000293441 SYT10Q6XYQ8 523 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 KCNJ14Q9UNX9 436 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 TEKT1Q969V4 418 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 TLDC2A0PJX2 215 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 DAPK3O43293 454 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 BAG1Q99933 345 aaPredicted RBP19.32■□□□□ 0.68
SHANK1-201ENST00000293441 CALCOCO1Q9P1Z2 691 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
SHANK1-201ENST00000293441 GCNT3O95395 438 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 ERCC3P19447 782 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 CSGALNACT2Q8N6G5 542 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 PAGR1Q9BTK6 254 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 PSMC4P43686 418 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 MTRF1LQ9UGC7 380 aaKnown RBP19.32■□□□□ 0.68
SHANK1-201ENST00000293441 CSADQ9Y600 493 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 AOX1Q06278 1338 aa19.32■□□□□ 0.68
SHANK1-201ENST00000293441 E7EVH7 732 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 M0QZ92 97 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 KCNK9Q9NPC2 374 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 STK24Q9Y6E0 443 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 SYNRGQ9UMZ2 1314 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 ARID4AP29374 1257 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-201ENST00000293441 DTNBO60941 627 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 KRT19P08727 400 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 DNM2P50570 870 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 UAP1Q16222 522 aaPredicted RBP19.31■□□□□ 0.68
SHANK1-201ENST00000293441 LZTS2Q9BRK4 669 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 TCP10L2B9ZVM9 353 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 DYNC1I1O14576 645 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 SLU7O95391 586 aaKnown RBP19.31■□□□□ 0.68
SHANK1-201ENST00000293441 PPP1R21Q6ZMI0 780 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 C2CD5Q86YS7 1000 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
SHANK1-201ENST00000293441 CETN3O15182 167 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 TNNC1P63316 161 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 SPOUT1Q5T280 376 aaKnown RBP19.3■□□□□ 0.68
SHANK1-201ENST00000293441 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
SHANK1-201ENST00000293441 KIAA1524Q8TCG1 905 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 SORBS3O60504 671 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 PPARAQ07869 468 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 MRPL44Q9H9J2 332 aaKnown RBP19.3■□□□□ 0.68
SHANK1-201ENST00000293441 CUTAO60888 179 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 SCNN1DP51172 638 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 VWA3BQ502W6 1294 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 ARHGAP27Q6ZUM4 889 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
SHANK1-201ENST00000293441 CALCOCO2Q13137 446 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 PAK1Q13153 545 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 VPS54Q9P1Q0 977 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 FRMPD2Q68DX3 1309 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms