RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ATG9AQ7Z3C6 839 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 DRC1Q96MC2 740 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 SLF1Q9BQI6 1058 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 BLZF1Q9H2G9 400 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCAF4-201ENST00000286835 SLC4A4Q9Y6R1 1079 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 CDC27P30260 824 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.03
SCAF4-201ENST00000286835 SYNE4Q8N205 404 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 PLIN2Q99541 437 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 CRACR2AQ9BSW2 395 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 NOSTRINQ8IVI9 506 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 MAN1B1Q9UKM7 699 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 CTNND2Q9UQB3 1225 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 PDE4BQ07343 736 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 CEP112Q8N8E3 955 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 RUFY1Q96T51 708 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 PLEKHA4Q9H4M7 779 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 MAGEC2Q9UBF1 373 aaPredicted RBP15.21■□□□□ 0.03
SCAF4-201ENST00000286835 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
SCAF4-201ENST00000286835 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 H2AFXP16104 143 aaPredicted RBP15.21■□□□□ 0.02
SCAF4-201ENST00000286835 ITGA6P23229 1130 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 MLKLQ8NB16 471 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 CCDC148Q8NFR7 591 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 RASSF4Q9H2L5 321 aa15.21■□□□□ 0.02
SCAF4-201ENST00000286835 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.02
SCAF4-201ENST00000286835 STX10O60499 249 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 PRDM1O75626 825 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 NCAPHQ15003 741 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 METTL16Q86W50 562 aaKnown RBP15.2■□□□□ 0.02
SCAF4-201ENST00000286835 VPS54Q9P1Q0 977 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 HDXQ7Z353 690 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
SCAF4-201ENST00000286835 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
SCAF4-201ENST00000286835 TAB2Q9NYJ8 693 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 SNAP23O00161 211 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
SCAF4-201ENST00000286835 TBC1D10CQ8IV04 446 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 PARP3Q9Y6F1 533 aa15.2■□□□□ 0.02
SCAF4-201ENST00000286835 CASP14P31944 242 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 CYP2C19P33261 490 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 RFC4P35249 363 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 KANK3Q6NY19 840 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 ACRBPQ8NEB7 543 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 JADE2Q9NQC1 790 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 ZNHIT6Q9NWK9 470 aaKnown RBP15.19■□□□□ 0.02
SCAF4-201ENST00000286835 SYNRGQ9UMZ2 1314 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 TEX33O43247 280 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 TXLNAP40222 546 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 RBL2Q08999 1139 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 DNAJC21Q5F1R6 531 aaKnown RBP15.19■□□□□ 0.02
SCAF4-201ENST00000286835 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-201ENST00000286835 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-201ENST00000286835 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 ANTXR2P58335 489 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 SLC35F6Q8N357 371 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 RGS22Q8NE09 1264 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 TSPYL1Q9H0U9 437 aa15.19■□□□□ 0.02
SCAF4-201ENST00000286835 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-201ENST00000286835 C3P01024 1663 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 UTYO14607 1347 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 FOXO4P98177 505 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 PPARDQ03181 441 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 GRIN1Q05586 938 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-201ENST00000286835 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 BPIFA3Q9BQP9 254 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 ADAM21Q9UKJ8 722 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 ANKARQ7Z5J8 1434 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 CYP27B1O15528 508 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 UBXN1Q04323 297 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.028e-7■■■■■ 28.2
SCAF4-201ENST00000286835 RABGGTAQ92696 567 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 ENC1O14682 589 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 NLRP5P59047 1200 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 CTR9Q6PD62 1173 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 NBPF5PQ86XG9 351 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-201ENST00000286835 CSRNP2Q9H175 543 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
SCAF4-201ENST00000286835 PPP6R2O75170 966 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 ZMYND10O75800 440 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 KRT9P35527 623 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 REXO1L1PQ8IX06 675 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
SCAF4-201ENST00000286835 MCM7P33993 719 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms