RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CCDC129Q6ZRS4 1044 aa14.93□□□□□ -0.02
NUP54-201ENST00000264883 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
NUP54-201ENST00000264883 LINC00301Q8NCQ3 95 aa14.93□□□□□ -0.02
NUP54-201ENST00000264883 MRPL44Q9H9J2 332 aaKnown RBP14.93□□□□□ -0.02
NUP54-201ENST00000264883 FAM169AQ9Y6X4 670 aa14.93□□□□□ -0.02
NUP54-201ENST00000264883 WNK3Q9BYP7 1800 aa14.93□□□□□ -0.02
NUP54-201ENST00000264883 E7EWF7 191 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 TUBBP07437 444 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 SETQ01105 290 aaPredicted RBP14.92□□□□□ -0.02
NUP54-201ENST00000264883 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 TUBB2AQ13885 445 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 TC2NQ8N9U0 490 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 CTCFLQ8NI51 663 aaPredicted RBP14.92□□□□□ -0.02
NUP54-201ENST00000264883 DBNDD2Q9BQY9 259 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 TUBB2BQ9BVA1 445 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 EBAG9O00559 213 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
NUP54-201ENST00000264883 SYF2O95926 243 aaKnown RBP14.92□□□□□ -0.02
NUP54-201ENST00000264883 CCDC175P0C221 793 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 CCT5P48643 541 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 ADKP55263 362 aaKnown RBP14.92□□□□□ -0.02
NUP54-201ENST00000264883 TRDNQ13061 729 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
NUP54-201ENST00000264883 PAG1Q9NWQ8 432 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
NUP54-201ENST00000264883 KIF5CO60282 957 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 AARSP49588 968 aaKnown RBP eCLIP14.91□□□□□ -0.02
NUP54-201ENST00000264883 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 SMARCC1Q92922 1105 aaPredicted RBP14.91□□□□□ -0.02
NUP54-201ENST00000264883 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
NUP54-201ENST00000264883 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 VIPAS39Q9H9C1 493 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 LZTFL1Q9NQ48 299 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 INTS13Q9NVM9 706 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 NWD2Q9ULI1 1742 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 PAPPAQ13219 1627 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 WDR19Q8NEZ3 1342 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 CCDC189A1A4V9 331 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 ERVV-2B6SEH9 535 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 KIF4BQ2VIQ3 1234 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 GBP6Q6ZN66 633 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 FANCLQ9NW38 375 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 CLIC4Q9Y696 253 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
NUP54-201ENST00000264883 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 SPTLC2O15270 562 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 CABP4P57796 275 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 DDX46Q7L014 1031 aaKnown RBP14.9□□□□□ -0.02
NUP54-201ENST00000264883 CNPY4Q8N129 248 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
NUP54-201ENST00000264883 TACO1Q9BSH4 297 aaKnown RBP14.9□□□□□ -0.02
NUP54-201ENST00000264883 CDHR2Q9BYE9 1310 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 CTAGE15A4D2H0 777 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 ADAMTS2O95450 1211 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 CTAGE8P0CG41 777 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 HSPD1P10809 573 aaKnown RBP14.9□□□□□ -0.02
NUP54-201ENST00000264883 CMA1P23946 247 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 CCT2P78371 535 aaKnown RBP14.9□□□□□ -0.02
NUP54-201ENST00000264883 CTAGE6Q86UF2 777 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 CTAGE4Q8IX94 777 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 IGSF22Q8N9C0 903 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 GIMAP7Q8NHV1 300 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 SLIT2O94813 1529 aa14.9□□□□□ -0.02
NUP54-201ENST00000264883 SHOX2O60902 331 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 INPP5BP32019 993 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 MTF1Q14872 753 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 SPECC1LQ69YQ0 1117 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 CEP120Q8N960 986 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 TUBE1Q9UJT0 475 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 CTAGE9A4FU28 777 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 SNRPA1P09661 255 aaKnown RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 PFKFB1P16118 471 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 IL15P40933 162 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 ZNF569Q5MCW4 686 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 MYSM1Q5VVJ2 828 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 SYNE3Q6ZMZ3 975 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 JPH2Q9BR39 696 aaPredicted RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 A1CFQ9NQ94 594 aaKnown RBP14.89□□□□□ -0.03
NUP54-201ENST00000264883 RAI14Q9P0K7 980 aa14.89□□□□□ -0.03
NUP54-201ENST00000264883 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 FDPSP14324 419 aaKnown RBP14.88□□□□□ -0.03
NUP54-201ENST00000264883 MYL6BP14649 208 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 WDR93Q6P2C0 686 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 UBE3BQ7Z3V4 1068 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 LRP10Q7Z4F1 713 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 JMYQ8N9B5 988 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 GNL3LQ9NVN8 582 aaKnown RBP14.88□□□□□ -0.03
NUP54-201ENST00000264883 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
NUP54-201ENST00000264883 ZFYP08048 801 aaPredicted RBP14.88□□□□□ -0.03
NUP54-201ENST00000264883 PRPF38AQ8NAV1 312 aaKnown RBP14.88□□□□□ -0.03
NUP54-201ENST00000264883 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
NUP54-201ENST00000264883 GOLIM4O00461 696 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms