RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CTDSPL2Q05D32 466 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 HIC1Q14526 733 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 TMEM130Q8N3G9 435 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 RASSF10A6NK89 507 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 GNAI3P08754 354 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 PDIA3P30101 505 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 AOC3Q16853 763 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 SYT17Q9BSW7 474 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 MYL10Q9BUA6 226 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 TMEM63CQ9P1W3 806 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 SCN1AP35498 2009 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 COL4A3Q01955 1670 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 GPAA1O43292 621 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 CXCL9Q07325 125 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 AAMPQ13685 434 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 SRBD1Q8N5C6 995 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 UTP14AQ9BVJ6 771 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 MAD2L2Q9UI95 211 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 DENND4CQ5VZ89 1909 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 MYO16Q9Y6X6 1858 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 KIAA2012Q0VF49 1180 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 CDC42EP5Q6NZY7 148 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 C22orf23Q9BZE7 217 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 COL20A1Q9P218 1284 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 FBXO3Q9UK99 471 aa6.95□□□□□ -1.3
TOPBP1-201ENST00000260810 OTUD7BQ6GQQ9 843 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 IL15P40933 162 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 MMTAG2Q9BU76 263 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 CHD5Q8TDI0 1954 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 ZNF280AP59817 542 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 ALX1Q15699 326 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 ARMT1Q9H993 441 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 LPIN2Q92539 896 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 PTPN18Q99952 460 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 IKZF4Q9H2S9 585 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 GJD2Q9UKL4 321 aa6.94□□□□□ -1.3
TOPBP1-201ENST00000260810 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 LDHAL6AQ6ZMR3 332 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 TBC1D5Q92609 795 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 INTS13Q9NVM9 706 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 WNT10BO00744 389 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 HOXD13P35453 343 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 RESTQ13127 1097 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 MOB2Q70IA6 237 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 GJA10Q969M2 543 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 DBNDD1Q9H9R9 158 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 C21orf2O43822 256 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 STBD1O95210 358 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 PLEKHA8P1O95397 391 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 EDN1P05305 212 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 MYLKQ15746 1914 aa6.93□□□□□ -1.3
TOPBP1-201ENST00000260810 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 MIGA1Q8NAN2 632 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 ATF5Q9Y2D1 282 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 CNTNAP5Q8WYK1 1306 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 ADGRA2Q96PE1 1338 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 PRAMEF18Q5VWM3 479 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 RBM43Q6ZSC3 357 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 ANKS1AQ92625 1134 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 FNDC1Q4ZHG4 1894 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 RNF225M0QZC1 329 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 RAB11FIP3O75154 756 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 IRX5P78411 483 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 TNPO1Q92973 898 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 PNNQ9H307 717 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 STARD3NLO95772 234 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 RXRAP19793 462 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 SEMA3FQ13275 785 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 PUM3Q15397 648 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 TRAPPC3LQ5T215 181 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 FIZ1Q96SL8 496 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 MYH10P35580 1976 aa6.92□□□□□ -1.3
TOPBP1-201ENST00000260810 FOXN1O15353 648 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 ECE1P42892 770 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 TTC6Q86TZ1 520 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 SGMS1Q86VZ5 419 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 PANK2Q9BZ23 570 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 ADAMTS5Q9UNA0 930 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 RTCBQ9Y3I0 505 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 CNMDO75829 334 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 UBE3CQ15386 1083 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 RAB11FIP4Q86YS3 637 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 IFNL3Q8IZI9 196 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 NUDT12Q9BQG2 462 aa6.91□□□□□ -1.3
TOPBP1-201ENST00000260810 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 431.6 ms