RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
SDCBP-201ENST00000260130 ATP8A2Q9NTI2 1148 aa20.13■□□□□ 0.81
SDCBP-201ENST00000260130 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
SDCBP-201ENST00000260130 ZMYM1Q5SVZ6 1142 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 WNK4Q96J92 1243 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 SNCAIPQ9Y6H5 919 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 MYH7P12883 1935 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 FAM196BA6NMK8 535 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 MKRN3Q13064 507 aaKnown RBP20.12■□□□□ 0.81
SDCBP-201ENST00000260130 SLC4A8Q2Y0W8 1093 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 TTC6Q86TZ1 520 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 METTL16Q86W50 562 aaKnown RBP20.12■□□□□ 0.81
SDCBP-201ENST00000260130 MCM9Q9NXL9 1143 aa20.12■□□□□ 0.81
SDCBP-201ENST00000260130 M0R2C6 588 aa20.11■□□□□ 0.81
SDCBP-201ENST00000260130 ZBTB48P10074 688 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-201ENST00000260130 OPTNQ96CV9 577 aa20.11■□□□□ 0.81
SDCBP-201ENST00000260130 SEC62Q99442 399 aaKnown RBP20.11■□□□□ 0.81
SDCBP-201ENST00000260130 CDK5RAP2Q96SN8 1893 aa20.11■□□□□ 0.81
SDCBP-201ENST00000260130 FOCADQ5VW36 1801 aa20.11■□□□□ 0.81
SDCBP-201ENST00000260130 GPAA1O43292 621 aa20.11■□□□□ 0.81
SDCBP-201ENST00000260130 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-201ENST00000260130 CRACR2BQ8N4Y2 399 aaPredicted RBP20.11■□□□□ 0.81
SDCBP-201ENST00000260130 NOL9Q5SY16 702 aaKnown RBP20.1■□□□□ 0.81
SDCBP-201ENST00000260130 ERO1BQ86YB8 467 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 REM2Q8IYK8 340 aaPredicted RBP20.1■□□□□ 0.81
SDCBP-201ENST00000260130 DDRGK1Q96HY6 314 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 TRIM34Q9BYJ4 488 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 WBP1LQ9NX94 342 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 SPDYE5A6NIY4 337 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 CTNND1O60716 968 aaKnown RBP20.1■□□□□ 0.81
SDCBP-201ENST00000260130 GJA5P36382 358 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 TTC22Q5TAA0 569 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 CNKSR2Q8WXI2 1034 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 THSD7BQ9C0I4 1608 aa20.1■□□□□ 0.81
SDCBP-201ENST00000260130 GNAT2P19087 354 aa20.09■□□□□ 0.81
SDCBP-201ENST00000260130 PLCD1P51178 756 aa20.09■□□□□ 0.81
SDCBP-201ENST00000260130 EHD4Q9H223 541 aa20.09■□□□□ 0.81
SDCBP-201ENST00000260130 SERPINB13Q9UIV8 391 aa20.09■□□□□ 0.81
SDCBP-201ENST00000260130 OTOFQ9HC10 1997 aa20.08■□□□□ 0.81
SDCBP-201ENST00000260130 SCYL3Q8IZE3 742 aa20.08■□□□□ 0.81
SDCBP-201ENST00000260130 OTUD5Q96G74 571 aa20.08■□□□□ 0.81
SDCBP-201ENST00000260130 DNAJC18Q9H819 358 aa20.08■□□□□ 0.81
SDCBP-201ENST00000260130 HELLSQ9NRZ9 838 aa20.08■□□□□ 0.81
SDCBP-201ENST00000260130 GSG1L2A8MUP6 293 aa20.08■□□□□ 0.8
SDCBP-201ENST00000260130 SDSP20132 328 aa20.08■□□□□ 0.8
SDCBP-201ENST00000260130 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
SDCBP-201ENST00000260130 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
SDCBP-201ENST00000260130 GSPT1P15170 499 aaKnown RBP20.07■□□□□ 0.8
SDCBP-201ENST00000260130 PPATQ06203 517 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 GIMAP6Q6P9H5 292 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 BEGAINQ9BUH8 593 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 PICK1Q9NRD5 415 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 MANSC4A6NHS7 340 aaPredicted RBP20.07■□□□□ 0.8
SDCBP-201ENST00000260130 CAP2P40123 477 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
SDCBP-201ENST00000260130 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
SDCBP-201ENST00000260130 USP17L12C9JPN9 530 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 USP17L21D6R901 530 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 TM4SF4P48230 202 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 INHBEP58166 350 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 PPIL2Q13356 520 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 RRP1BQ14684 758 aaKnown RBP20.06■□□□□ 0.8
SDCBP-201ENST00000260130 AMOTL1Q8IY63 956 aa20.06■□□□□ 0.8
SDCBP-201ENST00000260130 APPP05067 770 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 CYP2D6P10635 497 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 NMIQ13287 307 aaPredicted RBP20.05■□□□□ 0.8
SDCBP-201ENST00000260130 MCMDC2Q4G0Z9 681 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 MYH1P12882 1939 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 A0A0D9SFI3 127 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 IRF6O14896 467 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 PTPRAP18433 802 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 EVX2Q03828 476 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 C12orf60Q5U649 245 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 TATDN1Q6P1N9 297 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 CTR9Q6PD62 1173 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
SDCBP-201ENST00000260130 SIPA1L1O43166 1804 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 HIP1O00291 1037 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 GTF2A2P52657 109 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 GABPAQ06546 454 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 MS4A4AQ96JQ5 239 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 ZHX2Q9Y6X8 837 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 NACAP1Q9BZK3 213 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 DIAPH3Q9NSV4 1193 aa20.04■□□□□ 0.8
SDCBP-201ENST00000260130 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
SDCBP-201ENST00000260130 CYP2D7A0A087X1C5 515 aa20.03■□□□□ 0.8
SDCBP-201ENST00000260130 SBK1Q52WX2 424 aa20.03■□□□□ 0.8
SDCBP-201ENST00000260130 DDX60LQ5H9U9 1706 aaKnown RBP20.03■□□□□ 0.8
SDCBP-201ENST00000260130 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
SDCBP-201ENST00000260130 NAV1Q8NEY1 1877 aa20.03■□□□□ 0.8
SDCBP-201ENST00000260130 EPB41L4AQ9HCS5 686 aaPredicted RBP20.03■□□□□ 0.8
SDCBP-201ENST00000260130 TAOK2Q9UL54 1235 aa20.03■□□□□ 0.8
SDCBP-201ENST00000260130 SKAP1Q86WV1 359 aa20.02■□□□□ 0.8
SDCBP-201ENST00000260130 TESPA1A2RU30 521 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-201ENST00000260130 CA12O43570 354 aa20.02■□□□□ 0.8
SDCBP-201ENST00000260130 ASNSP08243 561 aa20.02■□□□□ 0.8
SDCBP-201ENST00000260130 SHMT1P34896 483 aa20.02■□□□□ 0.8
SDCBP-201ENST00000260130 TDO2P48775 406 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 295.2 ms