RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 A0A1W2PQ27 194 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 A0A1W2PQ64 194 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 A0A1W2PQD8 194 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 CHMP4CQ96CF2 233 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 SDF4Q9BRK5 362 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 IMPACTQ9P2X3 320 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 GPSM2P81274 684 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 MAP3K12Q12852 859 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 ADALQ6DHV7 355 aa19.61■□□□□ 0.73
FOXA1-201ENST00000250448 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.61■□□□□ 0.73
FOXA1-201ENST00000250448 V9GYY5 206 aaPredicted RBP19.61■□□□□ 0.73
FOXA1-201ENST00000250448 APPP05067 770 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 KMT5BQ4FZB7 885 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 RBM17Q96I25 401 aaKnown RBP19.6■□□□□ 0.73
FOXA1-201ENST00000250448 GNL3LQ9NVN8 582 aaKnown RBP19.6■□□□□ 0.73
FOXA1-201ENST00000250448 RAI14Q9P0K7 980 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 A0A1B0GVL5 298 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 FGAP02671 866 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 HIBADHP31937 336 aaKnown RBP19.6■□□□□ 0.73
FOXA1-201ENST00000250448 SLC15A2Q16348 729 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 FBXO33Q7Z6M2 555 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 ARMT1Q9H993 441 aa19.6■□□□□ 0.73
FOXA1-201ENST00000250448 FDPSP14324 419 aaKnown RBP19.59■□□□□ 0.73
FOXA1-201ENST00000250448 UBE3CQ15386 1083 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 CHST3Q7LGC8 479 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 ADGRA1Q86SQ6 560 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 TICAM2Q86XR7 235 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 PARP3Q9Y6F1 533 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 MBD4O95243 580 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 SLU7O95391 586 aaKnown RBP19.59■□□□□ 0.73
FOXA1-201ENST00000250448 NDUFA8P51970 172 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 ELF2Q15723 593 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 BPIFA3Q9BQP9 254 aa19.59■□□□□ 0.73
FOXA1-201ENST00000250448 STK38Q15208 465 aa19.58■□□□□ 0.73
FOXA1-201ENST00000250448 DPCR1Q3MIW9 517 aa19.58■□□□□ 0.73
FOXA1-201ENST00000250448 ZNF771Q7L3S4 317 aaPredicted RBP19.58■□□□□ 0.73
FOXA1-201ENST00000250448 CCDC150Q8NCX0 1101 aa19.58■□□□□ 0.73
FOXA1-201ENST00000250448 AIDAQ96BJ3 306 aa19.58■□□□□ 0.73
FOXA1-201ENST00000250448 KIAA1468Q9P260 1216 aa19.58■□□□□ 0.73
FOXA1-201ENST00000250448 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.72
FOXA1-201ENST00000250448 LINC00301Q8NCQ3 95 aa19.58■□□□□ 0.72
FOXA1-201ENST00000250448 SECISBP2LQ93073 1101 aaKnown RBP19.58■□□□□ 0.72
FOXA1-201ENST00000250448 PRKAB2O43741 272 aa19.58■□□□□ 0.72
FOXA1-201ENST00000250448 KRT222Q8N1A0 295 aa19.58■□□□□ 0.72
FOXA1-201ENST00000250448 FLAD1Q8NFF5 587 aa19.58■□□□□ 0.72
FOXA1-201ENST00000250448 ANKRD31Q8N7Z5 1873 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 UFL1O94874 794 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 SMC2O95347 1197 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 SF3A1Q15459 793 aaKnown RBP19.57■□□□□ 0.72
FOXA1-201ENST00000250448 FBXO38Q6PIJ6 1188 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 XPO4Q9C0E2 1151 aaKnown RBP19.57■□□□□ 0.72
FOXA1-201ENST00000250448 STK32BQ9NY57 414 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 NEDD4P46934 1319 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 TMC6Q7Z403 805 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 KCNG4Q8TDN1 519 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 CLIC4Q9Y696 253 aa19.57■□□□□ 0.72
FOXA1-201ENST00000250448 XDHP47989 1333 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 YEATS4O95619 227 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 CYP7A1P22680 504 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 E4F1Q66K89 784 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-201ENST00000250448 LCORLQ8N3X6 602 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 STRBPQ96SI9 672 aaKnown RBP19.56■□□□□ 0.72
FOXA1-201ENST00000250448 IFNKQ9P0W0 207 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 FBXL16Q8N461 479 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 BRIP1Q9BX63 1249 aa19.56■□□□□ 0.72
FOXA1-201ENST00000250448 IRS2Q9Y4H2 1338 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 EVCP57679 992 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 SF3B2Q13435 895 aaKnown RBP19.55■□□□□ 0.72
FOXA1-201ENST00000250448 ARMCX5Q6P1M9 558 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 ZNF384Q8TF68 577 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 C8orf76Q96K31 380 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 PPP1R13BQ96KQ4 1090 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 POLR3EQ9NVU0 708 aa19.55■□□□□ 0.72
FOXA1-201ENST00000250448 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
FOXA1-201ENST00000250448 SPTLC2O15270 562 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 SRGNP10124 158 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 SFPQP23246 707 aaKnown RBP eCLIP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 PRDX5P30044 214 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 HOXA10P31260 410 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 TPM4P67936 248 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 GPHNQ9NQX3 736 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 PSDA5PKW4 1024 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 SLFN14P0C7P3 912 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 KCNJ6P48051 423 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 NLRP12P59046 1061 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 L2HGDHQ9H9P8 463 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 FAM53CQ9NYF3 392 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 POLLQ9UGP5 575 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 SLC3A2P08195 630 aaKnown RBP19.54■□□□□ 0.72
FOXA1-201ENST00000250448 NKX2-3Q8TAU0 364 aa19.54■□□□□ 0.72
FOXA1-201ENST00000250448 C6orf229H3BNL8 230 aa19.53■□□□□ 0.72
FOXA1-201ENST00000250448 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
FOXA1-201ENST00000250448 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms