RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TRIM21P19474 475 aaKnown RBP5.21□□□□□ -1.57
VPS13C-201ENST00000249837 KIF23Q02241 960 aaPredicted RBP5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PLA2G4DQ86XP0 818 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC42Q96M95 316 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PSDA5PKW4 1024 aaPredicted RBP5.21□□□□□ -1.57
VPS13C-201ENST00000249837 TMEM232C9JQI7 657 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PTPN12Q05209 780 aaKnown RBP5.21□□□□□ -1.57
VPS13C-201ENST00000249837 SPECC1LQ69YQ0 1117 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 NBPF11Q86T75 865 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 ATRIPQ8WXE1 791 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PYM1Q9BRP8 204 aaKnown RBP5.21□□□□□ -1.57
VPS13C-201ENST00000249837 INCENPQ9NQS7 918 aa5.21□□□□□ -1.57
VPS13C-201ENST00000249837 PHKG2P15735 406 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PRPF4BQ13523 1007 aaKnown RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 CNGA4Q8IV77 575 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 OSBP2Q969R2 916 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 ZMYM6O95789 1325 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PSMA7O14818 248 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 CALML3P27482 149 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 FBXO38Q6PIJ6 1188 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PLCD4Q9BRC7 762 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 GOPCQ9HD26 462 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PTPRMP28827 1452 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 RILPL1Q5EBL4 403 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PSMB7Q99436 277 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PLEKHA4Q9H4M7 779 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 INO80Q9ULG1 1556 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 MACROD2A1Z1Q3 448 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PLCD1P51178 756 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 SMC1AQ14683 1233 aaKnown RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PUM3Q15397 648 aaKnown RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PIK3AP1Q6ZUJ8 805 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 STOX1Q6ZVD7 989 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 SMYD4Q8IYR2 804 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 HINFPQ9BQA5 517 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 FMR1NBQ8N0W7 255 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PDE4BQ07343 736 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 WWC3Q9ULE0 1092 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 DLG5Q8TDM6 1919 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 TACC1O75410 805 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 NEFHP12036 1026 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 MAGEA1P43355 309 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PI16Q6UXB8 463 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 DZIP3Q86Y13 1208 aaKnown RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 MICALL1Q8N3F8 863 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 MYO6Q9UM54 1294 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PPP2R2CQ9Y2T4 447 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 GNAT2P19087 354 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 SLC39A14Q15043 492 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 SYCP1Q15431 976 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 FAM47AQ5JRC9 791 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 MEX3CQ5U5Q3 659 aaKnown RBP5.21□□□□□ -1.58
VPS13C-201ENST00000249837 ZNF710Q8N1W2 664 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 PLCD3Q8N3E9 789 aa5.21□□□□□ -1.58
VPS13C-201ENST00000249837 CARMIL3Q8ND23 1372 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ARHGEF28Q8N1W1 1705 aaKnown RBP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 NOSTRINQ8IVI9 506 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 MLKLQ8NB16 471 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 MAN1B1Q9UKM7 699 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 A2ML1A8K2U0 1454 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ITSN1Q15811 1721 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 F8W031 263 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ATP6V1AP38606 617 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 PHKA1P46020 1223 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 AKNAD1Q5T1N1 836 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TMTC1Q8IUR5 882 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 IFNL3Q8IZI9 196 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 SH3TC1Q8TE82 1336 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 GYS2P54840 703 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 KIF5AQ12840 1032 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TTC31Q49AM3 519 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 C19orf44Q9H6X5 657 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TFCP2L1Q9NZI6 479 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TBC1D8BQ0IIM8 1120 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ARHGEF25Q86VW2 580 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TMEM110-MUSTN1A8MSY1 372 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TNNI2P48788 182 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 MNAT1P51948 309 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 NBPF5PQ86XG9 351 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 RAB34Q9BZG1 259 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ERCC3P19447 782 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 EEF2KMTQ96G04 330 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 GPCPD1Q9NPB8 672 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TMCO5BA8MYB1 307 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 GNAQP50148 359 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ALS2CR12Q96Q35 445 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ASAP1Q9ULH1 1129 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 FAM170AA1A519 330 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 LINC00301Q8NCQ3 95 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 EPC1Q9H2F5 836 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ABCA9Q8IUA7 1624 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 HSF2BPO75031 334 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ZSCAN26Q16670 478 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 WWC2Q6AWC2 1192 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 CSGALNACT2Q8N6G5 542 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 NAA15Q9BXJ9 866 aaKnown RBP5.2□□□□□ -1.58
VPS13C-201ENST00000249837 ZNF287Q9HBT7 754 aa5.2□□□□□ -1.58
VPS13C-201ENST00000249837 TCIRG1Q13488 830 aa5.19□□□□□ -1.58
VPS13C-201ENST00000249837 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms