RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 FAM184BQ9ULE4 1060 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 SNX14Q9Y5W7 946 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 EYA2O00167 538 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 NDC80O14777 642 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 NOL3O60936 208 aaKnown RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 B4E1Z4 1266 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 STX10O60499 249 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 VIMP08670 466 aaKnown RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 PLS1Q14651 629 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 PDE4DQ08499 809 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 VPS16Q9H269 839 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 DDB1Q16531 1140 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 SYCE1Q8N0S2 351 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 PLBD2Q8NHP8 589 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 ERCC5P28715 1186 aaPredicted RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 NUCKS1Q9H1E3 243 aaKnown RBP12.79□□□□□ -0.36
NIN-201ENST00000245441 ADGRL2O95490 1459 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 CIB2O75838 187 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 IP6K1Q92551 441 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 PLIN2Q99541 437 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
NIN-201ENST00000245441 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 AGTPBP1Q9UPW5 1226 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
NIN-201ENST00000245441 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 INPP5BP32019 993 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 SNX16P57768 344 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
NIN-201ENST00000245441 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 KRT5P13647 590 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
NIN-201ENST00000245441 KDM5CP41229 1560 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
NIN-201ENST00000245441 FAM169AQ9Y6X4 670 aa12.78□□□□□ -0.36
NIN-201ENST00000245441 PAK2Q13177 524 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 PLCB1Q9NQ66 1216 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 CETN3O15182 167 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 TTC38Q5R3I4 469 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.36
NIN-201ENST00000245441 DPH6Q7L8W6 267 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 ASIC2Q16515 512 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.36
NIN-201ENST00000245441 GMNNO75496 209 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
NIN-201ENST00000245441 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
NIN-201ENST00000245441 FNBP1Q96RU3 617 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 HOXC9P31274 260 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
NIN-201ENST00000245441 NAA25Q14CX7 972 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.37
NIN-201ENST00000245441 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 KIAA0232Q92628 1395 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 GBP1P32455 592 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 MTMR3Q13615 1198 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 PIK3AP1Q6ZUJ8 805 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
NIN-201ENST00000245441 FAM227BQ96M60 508 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
NIN-201ENST00000245441 CHL1O00533 1208 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 KRT9P35527 623 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 BACH1O14867 736 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 ITGA6P23229 1130 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 SEPT6Q14141 434 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 BIRC3Q13489 604 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 RNF123Q5XPI4 1314 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 SLC8A3P57103 927 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 CCDC62Q6P9F0 684 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 EYA3Q99504 573 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
NIN-201ENST00000245441 BAZ2BQ9UIF8 2168 aaKnown RBP12.76□□□□□ -0.37
NIN-201ENST00000245441 ZNF365Q70YC5 407 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 E7EVH7 732 aa12.76□□□□□ -0.37
NIN-201ENST00000245441 GCP02774 474 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 BCRP11274 1271 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 CCDC51Q96ER9 411 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 SH3TC1Q8TE82 1336 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 FAM135BQ49AJ0 1406 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 CALCRLQ16602 461 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 DENND2CQ68D51 928 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 DIS3L2Q8IYB7 885 aaKnown RBP12.75□□□□□ -0.37
NIN-201ENST00000245441 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
NIN-201ENST00000245441 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms