RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 STRBPQ96SI9 672 aaKnown RBP15.61■□□□□ 0.09
SLIRP-201ENST00000238688 PUS7LQ9H0K6 701 aaKnown RBP15.61■□□□□ 0.09
SLIRP-201ENST00000238688 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 RNF186Q9NXI6 227 aa15.61■□□□□ 0.09
SLIRP-201ENST00000238688 IQSEC3Q9UPP2 1182 aaPredicted RBP15.61■□□□□ 0.09
SLIRP-201ENST00000238688 OTOFQ9HC10 1997 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
SLIRP-201ENST00000238688 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
SLIRP-201ENST00000238688 GSTO1P78417 241 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 CCDC129Q6ZRS4 1044 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
SLIRP-201ENST00000238688 MAGEB6Q8N7X4 407 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 GBP4Q96PP9 640 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 AGXT2Q9BYV1 514 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
SLIRP-201ENST00000238688 AK2P54819 239 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 ADCK5Q3MIX3 580 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 SLF2Q8IX21 1173 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 ABHD8Q96I13 439 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 SAGE1Q9NXZ1 904 aa15.59■□□□□ 0.09
SLIRP-201ENST00000238688 TTF2Q9UNY4 1162 aaKnown RBP15.59■□□□□ 0.09
SLIRP-201ENST00000238688 ZNF213O14771 459 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 TRPA1O75762 1119 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 FGAP02671 866 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 TRDNQ13061 729 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 PRKG1Q13976 671 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 MAP3K11Q16584 847 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 SERPINA10Q9UK55 444 aa15.58■□□□□ 0.08
SLIRP-201ENST00000238688 DDX11L8A8MPP1 907 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 LDHCP07864 332 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 NF2P35240 595 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 TTLL12Q14166 644 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 NBPF12Q5TAG4 269 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 NAA16Q6N069 864 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 CDAN1Q8IWY9 1227 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 RGS22Q8NE09 1264 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 NCOA7Q8NI08 942 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 RNF41Q9H4P4 317 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 TDRD3Q9H7E2 651 aaKnown RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 RAI14Q9P0K7 980 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
SLIRP-201ENST00000238688 PPP2R3BQ9Y5P8 575 aa15.57■□□□□ 0.08
SLIRP-201ENST00000238688 E7EWF7 191 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 PDCP20941 246 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 CYP7A1P22680 504 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 MCM5P33992 734 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 CRKP46108 304 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 TM4SF4P48230 202 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 EVCP57679 992 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
SLIRP-201ENST00000238688 RASA3Q14644 834 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 NFKBIBQ15653 356 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 RALYLQ86SE5 291 aaKnown RBP15.56■□□□□ 0.08
SLIRP-201ENST00000238688 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
SLIRP-201ENST00000238688 TEPSINQ96N21 525 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 NAPBQ9H115 298 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 ABCF2Q9UG63 623 aa15.56■□□□□ 0.08
SLIRP-201ENST00000238688 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 MAGEB6P1A0A0J9YX57 407 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 GOLGA6L22H0YM25 854 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 FOXP2O15409 715 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 USP2O75604 605 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-201ENST00000238688 MBD4O95243 580 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 RBM5P52756 815 aaKnown RBP eCLIP15.55■□□□□ 0.08
SLIRP-201ENST00000238688 EXOSC10Q01780 885 aaKnown RBP15.55■□□□□ 0.08
SLIRP-201ENST00000238688 ARMC9Q7Z3E5 817 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
SLIRP-201ENST00000238688 CLMNQ96JQ2 1002 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 LLPHQ9BRT6 129 aaKnown RBP15.55■□□□□ 0.08
SLIRP-201ENST00000238688 MCOLN1Q9GZU1 580 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
SLIRP-201ENST00000238688 MYO1BO43795 1136 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 LDHBP07195 334 aaKnown RBP15.54■□□□□ 0.08
SLIRP-201ENST00000238688 PLCG2P16885 1265 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 HDLBPQ00341 1268 aaKnown RBP15.54■□□□□ 0.08
SLIRP-201ENST00000238688 MKRN3Q13064 507 aaKnown RBP15.54■□□□□ 0.08
SLIRP-201ENST00000238688 SPRYD7Q5W111 196 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 IFNL3Q8IZI9 196 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 ZNF274Q96GC6 653 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-201ENST00000238688 MRIQ9BWK5 157 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 KRT23Q9C075 422 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 ATP8A2Q9NTI2 1148 aa15.54■□□□□ 0.08
SLIRP-201ENST00000238688 BAG3O95817 575 aa15.53■□□□□ 0.08
SLIRP-201ENST00000238688 APPP05067 770 aa15.53■□□□□ 0.08
SLIRP-201ENST00000238688 FGD1P98174 961 aa15.53■□□□□ 0.08
SLIRP-201ENST00000238688 DZIP1Q86YF9 867 aaKnown RBP15.53■□□□□ 0.08
SLIRP-201ENST00000238688 FAM163AQ96GL9 167 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-201ENST00000238688 TMEM87BQ96K49 555 aa15.53■□□□□ 0.08
SLIRP-201ENST00000238688 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
SLIRP-201ENST00000238688 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
SLIRP-201ENST00000238688 CRNKL1Q9BZJ0 848 aaKnown RBP15.53■□□□□ 0.08
SLIRP-201ENST00000238688 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
SLIRP-201ENST00000238688 GSG1L2A8MUP6 293 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms