RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 AIDAQ96BJ3 306 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 EPSTI1Q96J88 318 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 MPHOSPH8Q99549 860 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 SH3TC1Q8TE82 1336 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 SLIT1O75093 1534 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 RAD9BQ6WBX8 426 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 OXER1Q8TDS5 423 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 FUT8Q9BYC5 575 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 TRIM10Q9UDY6 481 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 FAM208AQ9UK61 1670 aaKnown RBP19.09■□□□□ 0.65
CTDP1-201ENST00000075430 NEDD4P46934 1319 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 KRI1Q8N9T8 703 aaKnown RBP19.09■□□□□ 0.65
CTDP1-201ENST00000075430 PSMB7Q99436 277 aa19.09■□□□□ 0.65
CTDP1-201ENST00000075430 SRGAP2O75044 1071 aa19.08■□□□□ 0.65
CTDP1-201ENST00000075430 SSRP1Q08945 709 aaKnown RBP19.08■□□□□ 0.65
CTDP1-201ENST00000075430 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.65
CTDP1-201ENST00000075430 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.65
CTDP1-201ENST00000075430 AKR1B15C9JRZ8 316 aaPredicted RBP19.08■□□□□ 0.64
CTDP1-201ENST00000075430 FOXO4P98177 505 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 APOA5Q6Q788 366 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 MRFAP1Q9Y605 127 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 NWD1Q149M9 1564 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 PALLDQ8WX93 1383 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 IKBKBO14920 756 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 N4BP3O15049 544 aa19.08■□□□□ 0.64
CTDP1-201ENST00000075430 MB21D2Q8IYB1 491 aaPredicted RBP19.07■□□□□ 0.64
CTDP1-201ENST00000075430 GOLGA6L1Q8N7Z2 621 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 CWC15Q9P013 229 aaKnown RBP19.07■□□□□ 0.64
CTDP1-201ENST00000075430 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 DNAJC10Q8IXB1 793 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 PCMTD1Q96MG8 357 aaPredicted RBP19.07■□□□□ 0.64
CTDP1-201ENST00000075430 HDAC6Q9UBN7 1215 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 RRP15Q9Y3B9 282 aaKnown RBP19.07■□□□□ 0.64
CTDP1-201ENST00000075430 PRKAB2O43741 272 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 TXLNAP40222 546 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 TAB2Q9NYJ8 693 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
CTDP1-201ENST00000075430 VSNL1P62760 191 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 ZNF174Q15697 407 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 KCTD19Q17RG1 926 aaPredicted RBP19.06■□□□□ 0.64
CTDP1-201ENST00000075430 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 TEX13AQ9BXU3 409 aaPredicted RBP19.06■□□□□ 0.64
CTDP1-201ENST00000075430 NAPBQ9H115 298 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 TUBGCP6Q96RT7 1819 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 TPM1P09493 284 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 TDO2P48775 406 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.06■□□□□ 0.64
CTDP1-201ENST00000075430 ARMT1Q9H993 441 aa19.06■□□□□ 0.64
CTDP1-201ENST00000075430 RANBP6O60518 1105 aaKnown RBP19.05■□□□□ 0.64
CTDP1-201ENST00000075430 DHX8Q14562 1220 aaKnown RBP19.05■□□□□ 0.64
CTDP1-201ENST00000075430 NOA1Q8NC60 698 aaKnown RBP19.05■□□□□ 0.64
CTDP1-201ENST00000075430 VPS54Q9P1Q0 977 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 SMIM22K7EJ46 135 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 CAGE1Q8TC20 777 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 CSRNP2Q9H175 543 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 FAM53CQ9NYF3 392 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 WWC3Q9ULE0 1092 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 FOXP2O15409 715 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
CTDP1-201ENST00000075430 APPBP2Q92624 585 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 CTNND2Q9UQB3 1225 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
CTDP1-201ENST00000075430 ZNF532Q9HCE3 1301 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 E2F4Q16254 413 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 TMEM139Q8IV31 216 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 UTYO14607 1347 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 FAM170AA1A519 330 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 CTAGE9A4FU28 777 aa19.04■□□□□ 0.64
CTDP1-201ENST00000075430 CTAGE15A4D2H0 777 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 STX10O60499 249 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 CTAGE8P0CG41 777 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 CTAGE6Q86UF2 777 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 CTAGE4Q8IX94 777 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 GPATCH11Q8N954 259 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 RABGGTAQ92696 567 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 ABCF2Q9UG63 623 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 CDKL5O76039 1030 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-201ENST00000075430 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 TOPAZ1Q8N9V7 1692 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 CUTAO60888 179 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 MCAMP43121 646 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 PTPAQ15257 358 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 FILIP1LQ4L180 1135 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 RRAGBQ5VZM2 374 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 ZSWIM5Q9P217 1185 aa19.03■□□□□ 0.64
CTDP1-201ENST00000075430 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
CTDP1-201ENST00000075430 NOM1Q5C9Z4 860 aaKnown RBP19.02■□□□□ 0.64
CTDP1-201ENST00000075430 RESP18Q5W5W9 173 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 SRGAP1Q7Z6B7 1085 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 ERLIN1O75477 346 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 NOSTRINQ8IVI9 506 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 MAGEB6Q8N7X4 407 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 BPIFA3Q9BQP9 254 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 AGXT2Q9BYV1 514 aa19.02■□□□□ 0.64
CTDP1-201ENST00000075430 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms