RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Nop58Q6DFW4 536 aaKnown RBP16.71■□□□□ 0.27
Ldb3-207ENSMUST00000227819 Atg4aQ8C9S8 396 aa16.71■□□□□ 0.27
Ldb3-207ENSMUST00000227819 Ppp1r11Q8K1L5 131 aa16.71■□□□□ 0.27
Ldb3-207ENSMUST00000227819 FanclQ9CR14 375 aa16.71■□□□□ 0.27
Ldb3-207ENSMUST00000227819 OgdhlE9Q7L0 1029 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 DaxxO35613 739 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Slc16a10Q3U9N9 512 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Ncbp1Q3UYV9 790 aaKnown RBP16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Slc45a1Q8BIV7 751 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Inpp5bQ8K337 993 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Apbb1ipQ8R5A3 670 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Trex1Q91XB0 314 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Pcgf6Q99NA9 353 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Pold4Q9CWP8 107 aa16.7■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Krt28A6BLY7 462 aa16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Hsp90b1P08113 802 aaKnown RBP16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Irf5P56477 497 aa16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Dync1li2Q6PDL0 492 aaKnown RBP16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Ngly1Q9JI78 651 aa16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Aox3G3X982 1335 aa16.69■□□□□ 0.26
Ldb3-207ENSMUST00000227819 AU019823E9PUQ3 292 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Bnip3O55003 187 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Il7P10168 154 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Lamp1P11438 406 aaKnown RBP16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Wdr70Q3TWF6 657 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Qrich1Q3UA37 777 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Prpf38aQ4FK66 312 aaKnown RBP16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Leng1Q9DB98 261 aa16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.68■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fads2p1Q0VAX3 487 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fam83hQ148V8 1209 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Zfp341Q6PGC9 846 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Plekha4Q8VC98 588 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Katnbl1Q9CWJ3 299 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Ccdc39Q9D5Y1 937 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Disp2Q8CIP5 1345 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Ltbp2O08999 1813 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Cyp2d9P11714 504 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Lrch3Q8BVU0 778 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Traf7Q922B6 594 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Lamb1P02469 1786 aa16.67■□□□□ 0.26
Ldb3-207ENSMUST00000227819 B020004C17RikJ3QP07 232 aa16.66■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Rbm28Q8CGC6 750 aaKnown RBP16.66■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Gpr37l1Q99JG2 481 aa16.66■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Armcx1Q9CX83 456 aa16.66■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Pus3Q9JI38 481 aa16.66■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fam186bD3Z420 943 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Ythdc1E9Q5K9 736 aaKnown RBP16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Igfbp4P47879 254 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 PrkczQ02956 592 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 VrtnQ3SYK4 740 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Brip1Q5SXJ3 1174 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fam205cQ80YD3 371 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Bri3bpQ8BXV2 253 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Stac3Q8BZ71 360 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Sgpl1Q8R0X7 568 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Itgbl1Q8VDV0 494 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fubp1Q91WJ8 651 aaKnown RBP16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 HibadhQ99L13 335 aaKnown RBP16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Fsip1Q9D3V5 435 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Znhit2Q9QY66 399 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Sbf1Q6ZPE2 1867 aa16.65■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Igsf9bE9PZ19 1328 aa16.64■□□□□ 0.26
Ldb3-207ENSMUST00000227819 Frmd7A2AD83 703 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Hoxd10P28359 340 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Sema3eP70275 775 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Fndc3bQ6NWW9 1207 aaKnown RBP16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Aoc2Q812C9 757 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Scfd2Q8BTY8 684 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Ppp4r3bQ922R5 820 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Tbc1d7Q9D0K0 293 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Spint1Q9R097 507 aa16.64■□□□□ 0.25
Ldb3-207ENSMUST00000227819 CrcpO35427 148 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Slc4a4O88343 1079 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Znf784Q8BI69 297 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Dynll2Q9D0M5 89 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Ak7Q9D2H2 614 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Klrc1Q9Z202 244 aa16.63■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Vmn2r68L7N2B3 851 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 B230104I21RikQ3USW4 141 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Acap3Q6NXL5 833 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Ubap2lQ80X50 1107 aaKnown RBP16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 MlphQ91V27 590 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 HttP42859 3119 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Col2a1P28481 1487 aa16.62■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Trim5E9PV98 497 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Phldb3E9QAF4 648 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Sept2P42208 361 aaKnown RBP16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 GclcP97494 637 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Srrm1Q52KI8 946 aaKnown RBP16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Champ1Q8K327 802 aaKnown RBP16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Prkag2Q91WG5 566 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Add2Q9QYB8 725 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Usp31E9Q6Y8 1344 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 YdjcQ14BV6 310 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 HelbQ6NVF4 1074 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 ShbQ6PD21 503 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Prpf40bQ80W14 870 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Kcnq3Q8K3F6 873 aa16.61■□□□□ 0.25
Ldb3-207ENSMUST00000227819 Slc18a1Q8R090 521 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 97.5 ms