RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Cbx2P30658 519 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Rasa3Q60790 834 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ddx11Q6AXC6 880 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Exoc8Q6PGF7 716 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Supt16hQ920B9 1047 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Pagr1aQ99L02 253 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Bap1Q99PU7 728 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Rnf181Q9CY62 165 aa16.77■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Gm36210A0A1B0GS00 229 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Dennd3A2RT67 1274 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 NapbP28663 298 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 D630036H23RikQ3UQD6 204 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Senp6Q6P7W0 1132 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Olfr118Q7TRJ6 321 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ttll4Q80UG8 1193 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Shisa4Q8CA71 197 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Eaf2Q91ZD6 262 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 EspnQ9ET47 871 aa16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 PhaxQ9JJT9 385 aaKnown RBP16.76■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Tanc1Q0VGY8 1856 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Rgs12Q8CGE9 1381 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Myh6Q02566 1938 aaKnown RBP16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ldlrad1D3YYZ1 218 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ercc3P49135 783 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 CtshP49935 333 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Sh2d1b2Q45HK4 132 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ehmt1Q5DW34 1296 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Garem2Q6PAJ3 880 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ube2oQ6ZPJ3 1288 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Adam39Q7M762 756 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Sp8Q8BMJ8 486 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Calhm4Q8CE93 315 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Cdk8Q8R3L8 464 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Lrrfip2Q91WK0 415 aa16.75■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Mfap1aC0HKD8 439 aaKnown RBP16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Mfap1bC0HKD9 439 aaKnown RBP16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Oog1E9Q5G7 496 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Hap1O35668 628 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Abl1P00520 1123 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Znf667Q2TL60 609 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Spryd7Q3TFQ1 196 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 MyrflQ3UN70 904 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Brip1Q5SXJ3 1174 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Trnp1Q80ZI1 223 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ttc12Q8BW49 704 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Inpp5bQ8K337 993 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Il31raQ8K5B1 716 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Top1mtQ8R4U6 593 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ndufv1Q91YT0 464 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ppp6r3Q922D4 844 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Efcc1Q9JJF6 558 aa16.74■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ano3A2AHL1 981 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Tfcp2l1Q3UNW5 479 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Otop3Q80UF9 577 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ubxn10Q8BG34 277 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Apbb1ipQ8R5A3 670 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Gpsm2Q8VDU0 679 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 RragcQ99K70 398 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Acot3Q9QYR7 432 aa16.73■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Col2a1P28481 1487 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Has3O08650 554 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Pde11aP0C1Q2 933 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 ThbdP15306 577 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 PtpraP18052 829 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 CenpbP27790 599 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Atoh1P48985 351 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Nucb1Q02819 459 aaKnown RBP16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Fam170aQ66LM6 333 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Kank4Q6P9J5 1016 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Lrrc24Q8BHA1 521 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Btbd19S4R1I0 287 aa16.72■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Prr14lE9Q7C4 1971 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Otud5Q3U2S4 566 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Qrich1Q3UA37 777 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 B230104I21RikQ3USW4 141 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Hand2Q61039 217 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Scnn1aQ61180 699 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Ero1bQ8R2E9 467 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Trex1Q91XB0 314 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Dclk1Q9JLM8 756 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Pmfbp1Q9WVQ0 1022 aa16.71■□□□□ 0.27
Ccdc171-204ENSMUST00000126429 Palm3A2TJV2 734 aa16.7■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ythdc1E9Q5K9 736 aaKnown RBP16.7■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rc3h1Q4VGL6 1130 aaKnown RBP16.7■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rtp1Q8C8C1 263 aa16.7■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Mlh1Q9JK91 760 aa16.7■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ugt1a5B2RT14 529 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Prl7a2O54831 253 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ly6dP35459 127 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Q3TYL0 343 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Q3UK37 420 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Prr7Q3V0I2 269 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 4930567H17RikQ3V0K5 233 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Usp44Q8C2S0 711 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Gpr37l1Q99JG2 481 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Tfip11Q9ERA6 838 aaKnown RBP16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Zbtb12Q9Z150 459 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ltbp2O08999 1813 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Myh2G3UW82 1942 aa16.69■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cfap99A0A140LIX9 648 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms