RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Mei4Q8BRM6 389 aa8.54□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Smim5Q8BT42 78 aa8.54□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tab2Q99K90 693 aa8.54□□□□□ -1.04
Bdnf-207ENSMUST00000111047 4930548H24RikQ9D496 437 aa8.54□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Sel1lQ9Z2G6 790 aa8.54□□□□□ -1.04
Bdnf-207ENSMUST00000111047 AtrnQ9WU60 1428 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 1700029H14RikE9PY36 240 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Casp12O08736 419 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pde11aP0C1Q2 933 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Calm1P0DP26 149 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Calm2P0DP27 149 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Calm3P0DP28 149 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ddb1Q3U1J4 1140 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ap5z1Q3U829 807 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 MycbpapQ5SUV2 932 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cdc37Q61081 379 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Nme8Q715T0 586 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pnpla2Q8BJ56 486 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Slx1bQ8BX32 270 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ubac1Q8VDI7 409 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Rbm5Q91YE7 815 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cnpy3Q9DAU1 276 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Grin2dQ03391 1323 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pcdh10E9PXQ7 1057 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Map9Q3TRR0 646 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Txndc16Q7TN22 820 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Clic6Q8BHB9 596 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Uchl5Q9WUP7 329 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Stk39Q9Z1W9 556 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Nrxn3Q6P9K9 1571 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 MarcksP26645 309 aaKnown RBP8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tmed8Q3UHI4 326 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cnga2Q62398 664 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Krt39Q6IFX4 482 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Trak2Q6P9N8 913 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ppp2r5bQ6PD28 497 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Lrrd1Q8C0R9 853 aa8.53□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Zbtb7aO88939 569 aaKnown RBP8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Il17raQ60943 864 aa8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 RragbQ6NTA4 374 aa8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Kif1bpQ6ZPU9 617 aa8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cep128Q8BI22 1102 aa8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tmem87aQ8BXN9 555 aa8.52□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Robo1O89026 1612 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 PcQ05920 1178 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 LarsQ8BMJ2 1178 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Ano2Q8CFW1 1002 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Hexim1Q8R409 356 aaKnown RBP8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Abcb6Q9DC29 842 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Pip4k2aO70172 405 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Surf1P09925 306 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 EmbP21995 330 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Smarcc1P97496 1104 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Haus7Q8BKT8 364 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Pwp2Q8BU03 919 aaKnown RBP8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 MbipQ99LQ1 341 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Foxo4Q9WVH3 505 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Letm1Q9Z2I0 738 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 CpdO89001 1377 aa8.52□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Lcmt1A0A0U1RNF2 332 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Mapkapk5O54992 473 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Fez2Q6TYB5 348 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Adck5Q80V03 582 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Ppp2r2cQ8BG02 447 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Necab1Q8BG18 352 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Ranbp6Q8BIV3 1105 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Vps53Q8CCB4 832 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Nod2Q8K3Z0 1020 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Creld2Q9CYA0 350 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 RarsQ9D0I9 660 aaKnown RBP8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Cbx6Q9DBY5 414 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Efcc1Q9JJF6 558 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Irx5Q9JKQ4 484 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Magi2Q9WVQ1 1275 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 CoblQ5NBX1 1337 aaKnown RBP8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Cyp2d9P11714 504 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 GabrdP22933 449 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Kif2aP28740 705 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Csrnp2Q8BGQ2 534 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Susd4Q8BH32 490 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 DlatQ8BMF4 642 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Ankk1Q8BZ25 745 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Slc14a2Q8R4T9 930 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Rai14Q9EP71 979 aaKnown RBP8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Sall1Q9ER74 1322 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 BcorQ8CGN4 1759 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Brinp3Q499E0 766 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Sept12Q9D451 317 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Rcan1Q9JHG6 198 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Foxo3Q9WVH4 672 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 A0A1W2P7S8 802 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Cdc5lQ6A068 802 aaKnown RBP8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Olfr118Q7TRJ6 321 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Terb1Q8C0V1 768 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 CerkQ8K4Q7 531 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Stag1Q9D3E6 1258 aa8.51□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Tuft1O08970 390 aa8.5□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Nap1l2P51860 460 aa8.5□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Tspyl4Q8VD63 406 aa8.5□□□□□ -1.05
Bdnf-207ENSMUST00000111047 Klhl10Q9D5V2 608 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms