RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Sycp2lA0A0M3U1B0 842 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Fam89aQ14BJ1 175 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Cyp7b1Q60991 507 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Rps6ka5Q8C050 863 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ccdc150Q8CDI7 1110 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Rbm28Q8CGC6 750 aaKnown RBP17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Q8K2W9 541 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Tspyl4Q8VD63 406 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Ubac1Q8VDI7 409 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 MbipQ99LQ1 341 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 1700018B08RikQ9DA83 213 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Clstn1Q9EPL2 979 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Nbr1P97432 988 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Rbbp6P97868 1790 aaKnown RBP17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Adgra3Q7TT36 1310 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Xpo4Q9ESJ0 1151 aa17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 NesQ6P5H2 1864 aaKnown RBP17.9■□□□□ 0.46
Vcan-201ENSMUST00000109543 Grin2dQ03391 1323 aa17.89■□□□□ 0.46
Vcan-201ENSMUST00000109543 Kiaa1524Q8BWY9 907 aa17.89■□□□□ 0.46
Vcan-201ENSMUST00000109543 Nmt2O70311 529 aa17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 Cdkn1cP49919 348 aa17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ell2Q3UKU1 639 aa17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 Rbm42Q91V81 474 aaKnown RBP17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ankrd1Q9CR42 319 aa17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 RarsQ9D0I9 660 aaKnown RBP17.89■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ktn1Q61595 1327 aaKnown RBP17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Arhgap33Q80YF9 1305 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 A0A1Y7VML8 143 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Epb41l2O70318 988 aaKnown RBP17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Myl3P09542 204 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Pla2g12bQ99P27 195 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Hic2Q9JLZ6 619 aaKnown RBP17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Pnpla6Q3TRM4 1355 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Heg1E9Q7X6 1337 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Myo3bQ1EG27 1305 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Atp8b5A3FIN4 1183 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 4930523C07RikE9Q2T4 99 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Mum1l1Q4VA55 681 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Cyp4x1Q6A152 507 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ppp2r5bQ6PD28 497 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ube2oQ6ZPJ3 1288 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Kif1bpQ6ZPU9 617 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Taok3Q8BYC6 898 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Grpel1Q99LP6 217 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Filip1Q9CS72 1211 aa17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Arfgef1G3X9K3 1846 aaKnown RBP17.88■□□□□ 0.45
Vcan-201ENSMUST00000109543 Gm10134F6ZQC6 126 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Cyp3a25O09158 503 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ift122Q6NWV3 1182 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ctdspl2Q8BG15 465 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Zcrb1Q9CZ96 217 aaKnown RBP17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Tob2Q9JM55 345 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Atp12aQ9Z1W8 1035 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Tlr8P58682 1032 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Usp13Q5BKP2 858 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Fchsd1Q6PFY1 688 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ttll4Q80UG8 1193 aa17.87■□□□□ 0.45
Vcan-201ENSMUST00000109543 Sh3tc1G3X9F6 1346 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Gtf2f1Q3THK3 508 aaKnown RBP17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Adck5Q80V03 582 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Amhr2Q8K592 568 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 MypopQ8R4U1 393 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Rbm5Q91YE7 815 aaKnown RBP17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Prpf3Q922U1 683 aaKnown RBP17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Eif4enif1Q9EST3 983 aaKnown RBP17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Igsf9bE9PZ19 1328 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Slurp2P0DP59 97 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Traf3ip1Q149C2 625 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Kmt5bQ3U8K7 883 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Smc2Q8CG48 1191 aaKnown RBP17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Dnaaf4Q8R368 420 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Krt23Q99PS0 422 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Dydc2Q9D3X8 139 aa17.86■□□□□ 0.45
Vcan-201ENSMUST00000109543 Slc1a4O35874 532 aa17.85■□□□□ 0.45
Vcan-201ENSMUST00000109543 Tex2Q6ZPJ0 1128 aaKnown RBP17.85■□□□□ 0.45
Vcan-201ENSMUST00000109543 Sox30Q8CGW4 782 aa17.85■□□□□ 0.45
Vcan-201ENSMUST00000109543 Nup133Q8R0G9 1155 aa17.85■□□□□ 0.45
Vcan-201ENSMUST00000109543 Polr2dQ9D7M8 142 aaKnown RBP17.85■□□□□ 0.45
Vcan-201ENSMUST00000109543 Sema6bO54951 886 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Calm1P0DP26 149 aaKnown RBP17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Calm2P0DP27 149 aaKnown RBP17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Calm3P0DP28 149 aaKnown RBP17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Trim30aP15533 496 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 1700013D24RikQ0P521 120 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Uba5Q8VE47 403 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Vps16Q920Q4 839 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Ndufb9Q9CQJ8 179 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Iqca1Q9CUL5 857 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Dctpp1Q9QY93 170 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 GdaQ9R111 454 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Gm36210A0A1B0GS00 229 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Aknad1E9Q8N6 675 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Phldb3E9QAF4 648 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Usp49Q6P9L4 685 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Atxn2lQ7TQH0 1049 aaKnown RBP17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Olfr119Q7TRJ5 321 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Clec16aQ80U30 1036 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Csrnp2Q8BGQ2 534 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Triml1Q8BVP1 470 aa17.84■□□□□ 0.45
Vcan-201ENSMUST00000109543 Irx4Q9QY61 515 aa17.84■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms