RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Iffo1Q8BXL9 562 aa17.82■□□□□ 0.44
Ret-202ENSMUST00000088790 Ctnna2Q61301 953 aa17.82■□□□□ 0.44
Ret-202ENSMUST00000088790 Snd1Q78PY7 910 aaKnown RBP17.82■□□□□ 0.44
Ret-202ENSMUST00000088790 Pdrg1P59048 133 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Haus6Q6NV99 933 aaKnown RBP17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 NapgQ9CWZ7 312 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Med23Q80YQ2 1367 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Prr5lA2AVJ5 370 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Zfp213E9QAW0 468 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Cd22P35329 862 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 NpeppsQ11011 920 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Prpf38aQ4FK66 312 aaKnown RBP17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Msl1Q6PDM1 616 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Clic6Q8BHB9 596 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Pdcd6ipQ9WU78 869 aaKnown RBP17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Sos2Q02384 1333 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Pard3Q99NH2 1333 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Ccdc129Q14B48 1034 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Fam107bQ3TGF2 131 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 PicalmQ7M6Y3 660 aaKnown RBP17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Ankrd23Q812A3 306 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Ccnt1Q9QWV9 724 aaKnown RBP17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Tmem2Q5FWI3 1383 aa17.81■□□□□ 0.44
Ret-202ENSMUST00000088790 Parp1P11103 1013 aaKnown RBP17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Ifih1Q8R5F7 1025 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Atp1b3P97370 278 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Oxr1Q4KMM3 866 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Slc44a1Q6X893 653 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Il15P48346 162 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Wdr70Q3TWF6 657 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Znf697Q569E7 569 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 PsdQ5DTT2 1024 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Aox2Q5SGK3 1345 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Kif22Q3V300 660 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Large2Q5XPT3 690 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 TrhQ62361 256 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 NelfbQ8C4Y3 580 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Ssfa2Q922B9 1252 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Ehd4Q9EQP2 541 aa17.8■□□□□ 0.44
Ret-202ENSMUST00000088790 Simc1E9Q6E9 1354 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Dcaf17Q3TUL7 519 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Arhgef2Q60875 985 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Lrrc8aQ80WG5 810 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Senp1P59110 640 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Usp28Q5I043 1051 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Atp2b4Q6Q477 1205 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Gtf3c5Q8R2T8 520 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Cdhr2E9Q7P9 1308 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Ms4a1P19437 291 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Zhx1P70121 873 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Ccpg1Q640L3 753 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Mtss1lQ6P9S0 715 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Pym1Q8CHP5 203 aaKnown RBP17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Gle1Q8R322 699 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Cabp7Q91ZM8 215 aa17.79■□□□□ 0.44
Ret-202ENSMUST00000088790 Gemin5Q8BX17 1502 aaKnown RBP17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Rapgef1Q3UHC1 1224 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Prpf40bQ80W14 870 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Bsdc1Q80Y55 427 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 EhhadhQ9DBM2 718 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Znf394Q9Z1D9 521 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Ahdc1Q6PAL7 1594 aaKnown RBP17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Herc4Q6PAV2 1057 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Tubb2aQ7TMM9 445 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Olfr118Q7TRJ6 321 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 GlmnQ8BZM1 596 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Tubb2bQ9CWF2 445 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Ankrd35E9Q9D8 996 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Cetn3O35648 167 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Eya3P97480 510 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Zfp781Q0P5U5 243 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Atp1a2Q6PIE5 1020 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Rexo1Q7TT28 1213 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Smc1aQ9CU62 1233 aaKnown RBP17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Azi2Q9QYP6 405 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Rnf216P58283 853 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Gm5935Q497S0 212 aa17.78■□□□□ 0.44
Ret-202ENSMUST00000088790 Stat5bP42232 786 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Clca2Q8BG22 942 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Itsn2Q9Z0R6 1659 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Hook2Q7TMK6 716 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Emilin1Q99K41 1017 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Hsf2bpQ9D4G2 338 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Suclg2Q9Z2I8 433 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Ubn2Q80WC1 1314 aa17.77■□□□□ 0.44
Ret-202ENSMUST00000088790 Prdm11A2AGX3 565 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 1700018F24RikB2RW27 314 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Gm4758L7N258 96 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Cd3dP04235 173 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Plcb3P51432 1234 aaKnown RBP17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Armc2Q3URY6 854 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Tas2r124Q7M718 309 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Nrbp1Q99J45 535 aa17.77■□□□□ 0.43
Ret-202ENSMUST00000088790 Ppp1r9aH3BJD6 1292 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Col15a1O35206 1367 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Tnnc1P19123 161 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Ms4a2P20490 235 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Ublcp1Q8BGR9 318 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Gramd4Q8CB44 633 aa17.76■□□□□ 0.43
Ret-202ENSMUST00000088790 Bst2Q8R2Q8 172 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms