RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Vps53Q8CCB4 832 aa22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Tubgcp2Q921G8 905 aa22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Sf3b3Q921M3 1217 aaKnown RBP22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 CenpqQ9CPQ5 267 aa22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Elf2Q9JHC9 593 aa22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 CoblQ5NBX1 1337 aaKnown RBP22.62■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Enox1Q8BHR2 643 aaKnown RBP22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Polr2dQ9D7M8 142 aaKnown RBP22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Dpf1Q9QX66 387 aa22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Magi2Q9WVQ1 1275 aa22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Aox3G3X982 1335 aa22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Znfx1Q8R151 1909 aaKnown RBP22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Tuft1O08970 390 aa22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 ParvgQ9ERD8 331 aa22.61■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Kiaa1468Q148V7 1216 aa22.6■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Sept9Q80UG5 583 aa22.6■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Znf609Q8BZ47 1413 aa22.6■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Rhbdl3P58873 404 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Cbx1P83917 185 aaKnown RBP22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Tbx2Q60707 711 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Ctdspl2Q8BG15 465 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Prpf3Q922U1 683 aaKnown RBP22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Sh3bp5lQ99LH9 392 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Mrps25Q9D125 171 aaKnown RBP22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Efcc1Q9JJF6 558 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Gm10134F6ZQC6 126 aa22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Spata5Q3UMC0 893 aaKnown RBP22.59■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 A0A1L1SQF0 893 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Ankrd63A2ARS0 390 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Bnip3O55003 187 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Ift122Q6NWV3 1182 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Rbm15bQ6PHZ5 887 aaKnown RBP22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Gimap8Q75N62 688 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Otop3Q80UF9 577 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Frmd3Q8BHD4 595 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Pde5aQ8CG03 865 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Brd3Q8K2F0 726 aaKnown RBP22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Emilin2Q8K482 1074 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Ddx27Q921N6 760 aaKnown RBP22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Baiap2l1Q9DBJ3 514 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 Tob2Q9JM55 345 aa22.58■■□□□ 1.21
Ccdc34-201ENSMUST00000028580 PparaP23204 468 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Cyp4x1Q6A152 507 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 HelbQ6NVF4 1074 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Csrnp2Q8BGQ2 534 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Klhl30Q8C3F7 581 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pus7lQ8CE46 702 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Tfcp2Q9ERA0 502 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Irs4Q9Z0Y7 1216 aa22.58■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Tpm3-rs7D3Z2H9 248 aa22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Calm1P0DP26 149 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Calm2P0DP27 149 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Calm3P0DP28 149 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Plekha7Q3UIL6 1118 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Etf1Q8BWY3 437 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 MlphQ91V27 590 aa22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Cbx6Q9DBY5 414 aa22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pik3ap1Q9EQ32 811 aa22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 AfdnQ9QZQ1 1820 aaKnown RBP22.57■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pla2g4bP0C871 782 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Samsn1P57725 372 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Krt39Q6IFX4 482 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Ankk1Q8BZ25 745 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Frat2Q8K025 231 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Ddx41Q91VN6 622 aaKnown RBP22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Stox1B2RQL2 990 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Casp1P29452 402 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pla2g12bQ99P27 195 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Lmbr1Q9JIT0 490 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Rps6ka4Q9Z2B9 773 aa22.56■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Nup98Q6PFD9 1816 aaKnown RBP22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Nek1P51954 1203 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Paxbp1P58501 919 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 L1td1Q587J6 782 aaKnown RBP22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pex1Q5BL07 1284 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Usp49Q6P9L4 685 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 QarsQ8BML9 775 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Lrrd1Q8C0R9 853 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Iqca1Q9CUL5 857 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Foxo3Q9WVH4 672 aa22.55■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Ess2O70279 479 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Dynll1P63168 89 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 DSCC1Q14AI0 399 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Ehmt1Q5DW34 1296 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Tas2r124Q7M718 309 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Anks1bQ8BIZ1 1259 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Popdc2Q9ES82 367 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Pnpla6Q3TRM4 1355 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Myh6Q02566 1938 aaKnown RBP22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Dnajc25A2ALW5 357 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Phldb3E9QAF4 648 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Sdc2P43407 202 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 IntuQ059U7 942 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Mns1Q61884 491 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Ctr9Q62018 1173 aaKnown RBP22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Fbxo2Q80UW2 297 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Zkscan5Q9Z1D8 819 aa22.54■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 A0A1W2P7S8 802 aa22.53■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 Prr16A3KMN5 304 aa22.53■■□□□ 1.2
Ccdc34-201ENSMUST00000028580 CltaO08585 235 aa22.53■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms