RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 KRTAP5-9P26371 169 aa6.2□□□□□ -1.42
PHGDH-232ENST00000641947 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
PHGDH-232ENST00000641947 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
PHGDH-232ENST00000641947 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
PHGDH-232ENST00000641947 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
PHGDH-232ENST00000641947 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
PHGDH-232ENST00000641947 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
PHGDH-232ENST00000641947 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
PHGDH-232ENST00000641947 MT1GP13640 62 aa6.03□□□□□ -1.44
PHGDH-232ENST00000641947 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
PHGDH-232ENST00000641947 MT1MQ8N339 61 aa6.03□□□□□ -1.44
PHGDH-232ENST00000641947 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
PHGDH-232ENST00000641947 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
PHGDH-232ENST00000641947 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
PHGDH-232ENST00000641947 SPRR2EP22531 72 aa5.93□□□□□ -1.46
PHGDH-232ENST00000641947 SPRR2BP35325 72 aa5.93□□□□□ -1.46
PHGDH-232ENST00000641947 SPRR2AP35326 72 aa5.93□□□□□ -1.46
PHGDH-232ENST00000641947 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
PHGDH-232ENST00000641947 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
PHGDH-232ENST00000641947 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
PHGDH-232ENST00000641947 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
PHGDH-232ENST00000641947 NEBP20929 6669 aa5.8□□□□□ -1.48
PHGDH-232ENST00000641947 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PHGDH-232ENST00000641947 SPRR2DP22532 72 aa5.71□□□□□ -1.5
PHGDH-232ENST00000641947 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
PHGDH-232ENST00000641947 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PHGDH-232ENST00000641947 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
PHGDH-232ENST00000641947 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
PHGDH-232ENST00000641947 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
PHGDH-232ENST00000641947 INE1O15225 51 aa5.37□□□□□ -1.55
PHGDH-232ENST00000641947 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
PHGDH-232ENST00000641947 MT1AP04731 61 aa5.29□□□□□ -1.56
PHGDH-232ENST00000641947 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
PHGDH-232ENST00000641947 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
PHGDH-232ENST00000641947 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
PHGDH-232ENST00000641947 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
PHGDH-232ENST00000641947 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
PHGDH-232ENST00000641947 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
PHGDH-232ENST00000641947 MT4P47944 62 aa4.99□□□□□ -1.61
PHGDH-232ENST00000641947 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
PHGDH-232ENST00000641947 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
PHGDH-232ENST00000641947 KRTAP12-4P60329 112 aa4.96□□□□□ -1.61
PHGDH-232ENST00000641947 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
PHGDH-232ENST00000641947 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
PHGDH-232ENST00000641947 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
PHGDH-232ENST00000641947 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
PHGDH-232ENST00000641947 MT3P25713 68 aa4.76□□□□□ -1.65
PHGDH-232ENST00000641947 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
PHGDH-232ENST00000641947 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
PHGDH-232ENST00000641947 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
PHGDH-232ENST00000641947 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
PHGDH-232ENST00000641947 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
PHGDH-232ENST00000641947 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
PHGDH-232ENST00000641947 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
PHGDH-232ENST00000641947 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
PHGDH-232ENST00000641947 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
PHGDH-232ENST00000641947 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
PHGDH-232ENST00000641947 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
PHGDH-232ENST00000641947 MUC5ACP98088 5654 aa4□□□□□ -1.77
PHGDH-232ENST00000641947 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
PHGDH-232ENST00000641947 PRM1P04553 51 aa3.94□□□□□ -1.78
PHGDH-232ENST00000641947 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
PHGDH-232ENST00000641947 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
PHGDH-232ENST00000641947 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
PHGDH-232ENST00000641947 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
PHGDH-232ENST00000641947 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
PHGDH-232ENST00000641947 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
PHGDH-232ENST00000641947 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
PHGDH-232ENST00000641947 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
PHGDH-232ENST00000641947 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
PHGDH-232ENST00000641947 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
PHGDH-232ENST00000641947 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
PHGDH-232ENST00000641947 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
PHGDH-232ENST00000641947 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PHGDH-232ENST00000641947 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
PHGDH-232ENST00000641947 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
PHGDH-232ENST00000641947 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
PHGDH-232ENST00000641947 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms