RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
PHGDH-230ENST00000641927 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
PHGDH-230ENST00000641927 SPRR2EP22531 72 aa6.32□□□□□ -1.4
PHGDH-230ENST00000641927 SPRR2BP35325 72 aa6.32□□□□□ -1.4
PHGDH-230ENST00000641927 SPRR2AP35326 72 aa6.32□□□□□ -1.4
PHGDH-230ENST00000641927 NEBP20929 6669 aa6.29□□□□□ -1.4
PHGDH-230ENST00000641927 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
PHGDH-230ENST00000641927 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
PHGDH-230ENST00000641927 MT1LQ93083 61 aa6.23□□□□□ -1.41
PHGDH-230ENST00000641927 MT1GP13640 62 aa6.15□□□□□ -1.42
PHGDH-230ENST00000641927 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
PHGDH-230ENST00000641927 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
PHGDH-230ENST00000641927 SPRR2DP22532 72 aa6.1□□□□□ -1.43
PHGDH-230ENST00000641927 MT1MQ8N339 61 aa6.07□□□□□ -1.44
PHGDH-230ENST00000641927 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
PHGDH-230ENST00000641927 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
PHGDH-230ENST00000641927 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
PHGDH-230ENST00000641927 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
PHGDH-230ENST00000641927 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
PHGDH-230ENST00000641927 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
PHGDH-230ENST00000641927 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
PHGDH-230ENST00000641927 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
PHGDH-230ENST00000641927 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
PHGDH-230ENST00000641927 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
PHGDH-230ENST00000641927 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
PHGDH-230ENST00000641927 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
PHGDH-230ENST00000641927 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
PHGDH-230ENST00000641927 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
PHGDH-230ENST00000641927 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
PHGDH-230ENST00000641927 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
PHGDH-230ENST00000641927 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
PHGDH-230ENST00000641927 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
PHGDH-230ENST00000641927 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
PHGDH-230ENST00000641927 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
PHGDH-230ENST00000641927 MT4P47944 62 aa5.31□□□□□ -1.56
PHGDH-230ENST00000641927 MT1AP04731 61 aa5.31□□□□□ -1.56
PHGDH-230ENST00000641927 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
PHGDH-230ENST00000641927 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
PHGDH-230ENST00000641927 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
PHGDH-230ENST00000641927 KRTAP12-4P60329 112 aa5.21□□□□□ -1.57
PHGDH-230ENST00000641927 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
PHGDH-230ENST00000641927 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
PHGDH-230ENST00000641927 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
PHGDH-230ENST00000641927 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
PHGDH-230ENST00000641927 INE1O15225 51 aa5.05□□□□□ -1.6
PHGDH-230ENST00000641927 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
PHGDH-230ENST00000641927 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
PHGDH-230ENST00000641927 MT3P25713 68 aa4.83□□□□□ -1.64
PHGDH-230ENST00000641927 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
PHGDH-230ENST00000641927 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
PHGDH-230ENST00000641927 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
PHGDH-230ENST00000641927 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
PHGDH-230ENST00000641927 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
PHGDH-230ENST00000641927 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
PHGDH-230ENST00000641927 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
PHGDH-230ENST00000641927 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
PHGDH-230ENST00000641927 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
PHGDH-230ENST00000641927 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
PHGDH-230ENST00000641927 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
PHGDH-230ENST00000641927 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
PHGDH-230ENST00000641927 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
PHGDH-230ENST00000641927 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
PHGDH-230ENST00000641927 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
PHGDH-230ENST00000641927 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
PHGDH-230ENST00000641927 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
PHGDH-230ENST00000641927 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
PHGDH-230ENST00000641927 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
PHGDH-230ENST00000641927 PRM1P04553 51 aa3.68□□□□□ -1.82
PHGDH-230ENST00000641927 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
PHGDH-230ENST00000641927 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
PHGDH-230ENST00000641927 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
PHGDH-230ENST00000641927 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
PHGDH-230ENST00000641927 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PHGDH-230ENST00000641927 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
PHGDH-230ENST00000641927 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
PHGDH-230ENST00000641927 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PHGDH-230ENST00000641927 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
PHGDH-230ENST00000641927 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms