RNA–Protein interactions for RNA: ENST00000641719.1

CASC19-254, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-254ENST00000641719 M0R2T5 61 aa4.09□□□□□ -1.75
CASC19-254ENST00000641719 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
CASC19-254ENST00000641719 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
CASC19-254ENST00000641719 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CASC19-254ENST00000641719 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
CASC19-254ENST00000641719 MT2AP02795 61 aa3.98□□□□□ -1.77
CASC19-254ENST00000641719 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
CASC19-254ENST00000641719 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CASC19-254ENST00000641719 KRTAP10-10P60014 251 aa3.96□□□□□ -1.77
CASC19-254ENST00000641719 MT1FP04733 61 aa3.95□□□□□ -1.78
CASC19-254ENST00000641719 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
CASC19-254ENST00000641719 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
CASC19-254ENST00000641719 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
CASC19-254ENST00000641719 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
CASC19-254ENST00000641719 TNP1P09430 55 aa3.83□□□□□ -1.8
CASC19-254ENST00000641719 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CASC19-254ENST00000641719 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CASC19-254ENST00000641719 MT1BP07438 61 aa3.78□□□□□ -1.8
CASC19-254ENST00000641719 MT1XP80297 61 aa3.7□□□□□ -1.82
CASC19-254ENST00000641719 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
CASC19-254ENST00000641719 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
CASC19-254ENST00000641719 USH2AO75445 5202 aa3.5□□□□□ -1.85
CASC19-254ENST00000641719 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
CASC19-254ENST00000641719 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CASC19-254ENST00000641719 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
CASC19-254ENST00000641719 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CASC19-254ENST00000641719 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CASC19-254ENST00000641719 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CASC19-254ENST00000641719 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
CASC19-254ENST00000641719 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
CASC19-254ENST00000641719 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
CASC19-254ENST00000641719 MT1EP04732 61 aa3.24□□□□□ -1.89
CASC19-254ENST00000641719 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
CASC19-254ENST00000641719 KMT2DO14686 5537 aa3.21□□□□□ -1.89
CASC19-254ENST00000641719 MT1LQ93083 61 aa3.2□□□□□ -1.9
CASC19-254ENST00000641719 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
CASC19-254ENST00000641719 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
CASC19-254ENST00000641719 MT1GP13640 62 aa3.1□□□□□ -1.91
CASC19-254ENST00000641719 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CASC19-254ENST00000641719 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
CASC19-254ENST00000641719 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
CASC19-254ENST00000641719 MT1MQ8N339 61 aa3.04□□□□□ -1.92
CASC19-254ENST00000641719 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
CASC19-254ENST00000641719 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
CASC19-254ENST00000641719 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
CASC19-254ENST00000641719 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
CASC19-254ENST00000641719 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
CASC19-254ENST00000641719 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
CASC19-254ENST00000641719 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
CASC19-254ENST00000641719 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
CASC19-254ENST00000641719 INE1O15225 51 aa2.86□□□□□ -1.95
CASC19-254ENST00000641719 SPRR2EP22531 72 aa2.86□□□□□ -1.95
CASC19-254ENST00000641719 SPRR2BP35325 72 aa2.86□□□□□ -1.95
CASC19-254ENST00000641719 SPRR2AP35326 72 aa2.86□□□□□ -1.95
CASC19-254ENST00000641719 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
CASC19-254ENST00000641719 SPRR2DP22532 72 aa2.76□□□□□ -1.97
CASC19-254ENST00000641719 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
CASC19-254ENST00000641719 MT1AP04731 61 aa2.73□□□□□ -1.97
CASC19-254ENST00000641719 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CASC19-254ENST00000641719 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
CASC19-254ENST00000641719 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
CASC19-254ENST00000641719 NEBP20929 6669 aa2.64□□□□□ -1.99
CASC19-254ENST00000641719 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
CASC19-254ENST00000641719 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
CASC19-254ENST00000641719 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
CASC19-254ENST00000641719 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
CASC19-254ENST00000641719 MT4P47944 62 aa2.37□□□□□ -2.03
CASC19-254ENST00000641719 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
CASC19-254ENST00000641719 PRM1P04553 51 aa2.16□□□□□ -2.06
CASC19-254ENST00000641719 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
CASC19-254ENST00000641719 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
CASC19-254ENST00000641719 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
CASC19-254ENST00000641719 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
CASC19-254ENST00000641719 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
CASC19-254ENST00000641719 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CASC19-254ENST00000641719 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
CASC19-254ENST00000641719 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CASC19-254ENST00000641719 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms