RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
PHGDH-210ENST00000641115 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
PHGDH-210ENST00000641115 SPRR2EP22531 72 aa7.04□□□□□ -1.28
PHGDH-210ENST00000641115 SPRR2BP35325 72 aa7.04□□□□□ -1.28
PHGDH-210ENST00000641115 SPRR2AP35326 72 aa7.04□□□□□ -1.28
PHGDH-210ENST00000641115 NEBP20929 6669 aa7.02□□□□□ -1.28
PHGDH-210ENST00000641115 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
PHGDH-210ENST00000641115 MT1GP13640 62 aa6.97□□□□□ -1.29
PHGDH-210ENST00000641115 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
PHGDH-210ENST00000641115 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
PHGDH-210ENST00000641115 MT1MQ8N339 61 aa6.86□□□□□ -1.31
PHGDH-210ENST00000641115 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
PHGDH-210ENST00000641115 SPRR2DP22532 72 aa6.79□□□□□ -1.32
PHGDH-210ENST00000641115 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
PHGDH-210ENST00000641115 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
PHGDH-210ENST00000641115 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
PHGDH-210ENST00000641115 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
PHGDH-210ENST00000641115 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
PHGDH-210ENST00000641115 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
PHGDH-210ENST00000641115 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
PHGDH-210ENST00000641115 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
PHGDH-210ENST00000641115 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
PHGDH-210ENST00000641115 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
PHGDH-210ENST00000641115 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
PHGDH-210ENST00000641115 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
PHGDH-210ENST00000641115 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
PHGDH-210ENST00000641115 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
PHGDH-210ENST00000641115 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
PHGDH-210ENST00000641115 MT1AP04731 61 aa6.03□□□□□ -1.44
PHGDH-210ENST00000641115 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
PHGDH-210ENST00000641115 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
PHGDH-210ENST00000641115 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
PHGDH-210ENST00000641115 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
PHGDH-210ENST00000641115 MT4P47944 62 aa5.88□□□□□ -1.47
PHGDH-210ENST00000641115 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
PHGDH-210ENST00000641115 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
PHGDH-210ENST00000641115 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
PHGDH-210ENST00000641115 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
PHGDH-210ENST00000641115 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
PHGDH-210ENST00000641115 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
PHGDH-210ENST00000641115 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
PHGDH-210ENST00000641115 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
PHGDH-210ENST00000641115 H3BS24 57 aa5.52□□□□□ -1.53
PHGDH-210ENST00000641115 MT3P25713 68 aa5.48□□□□□ -1.53
PHGDH-210ENST00000641115 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
PHGDH-210ENST00000641115 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
PHGDH-210ENST00000641115 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
PHGDH-210ENST00000641115 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
PHGDH-210ENST00000641115 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
PHGDH-210ENST00000641115 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
PHGDH-210ENST00000641115 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
PHGDH-210ENST00000641115 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
PHGDH-210ENST00000641115 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
PHGDH-210ENST00000641115 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
PHGDH-210ENST00000641115 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
PHGDH-210ENST00000641115 INE1O15225 51 aa4.86□□□□□ -1.63
PHGDH-210ENST00000641115 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
PHGDH-210ENST00000641115 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
PHGDH-210ENST00000641115 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
PHGDH-210ENST00000641115 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
PHGDH-210ENST00000641115 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
PHGDH-210ENST00000641115 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
PHGDH-210ENST00000641115 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
PHGDH-210ENST00000641115 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PHGDH-210ENST00000641115 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
PHGDH-210ENST00000641115 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
PHGDH-210ENST00000641115 PRM1P04553 51 aa4.17□□□□□ -1.74
PHGDH-210ENST00000641115 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
PHGDH-210ENST00000641115 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
PHGDH-210ENST00000641115 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
PHGDH-210ENST00000641115 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
PHGDH-210ENST00000641115 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
PHGDH-210ENST00000641115 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PHGDH-210ENST00000641115 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
PHGDH-210ENST00000641115 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
PHGDH-210ENST00000641115 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
PHGDH-210ENST00000641115 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 49.7 ms