RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
PHGDH-209ENST00000641074 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
PHGDH-209ENST00000641074 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.4
PHGDH-209ENST00000641074 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
PHGDH-209ENST00000641074 MT1GP13640 62 aa6.29□□□□□ -1.4
PHGDH-209ENST00000641074 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
PHGDH-209ENST00000641074 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
PHGDH-209ENST00000641074 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
PHGDH-209ENST00000641074 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
PHGDH-209ENST00000641074 MT1MQ8N339 61 aa6.23□□□□□ -1.41
PHGDH-209ENST00000641074 H3BS24 57 aa6.21□□□□□ -1.41
PHGDH-209ENST00000641074 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
PHGDH-209ENST00000641074 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
PHGDH-209ENST00000641074 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
PHGDH-209ENST00000641074 SPRR2EP22531 72 aa6.13□□□□□ -1.43
PHGDH-209ENST00000641074 SPRR2BP35325 72 aa6.13□□□□□ -1.43
PHGDH-209ENST00000641074 SPRR2AP35326 72 aa6.13□□□□□ -1.43
PHGDH-209ENST00000641074 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PHGDH-209ENST00000641074 NEBP20929 6669 aa5.96□□□□□ -1.45
PHGDH-209ENST00000641074 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
PHGDH-209ENST00000641074 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
PHGDH-209ENST00000641074 SPRR2DP22532 72 aa5.9□□□□□ -1.46
PHGDH-209ENST00000641074 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
PHGDH-209ENST00000641074 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
PHGDH-209ENST00000641074 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
PHGDH-209ENST00000641074 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
PHGDH-209ENST00000641074 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
PHGDH-209ENST00000641074 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
PHGDH-209ENST00000641074 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
PHGDH-209ENST00000641074 MT1AP04731 61 aa5.5□□□□□ -1.53
PHGDH-209ENST00000641074 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
PHGDH-209ENST00000641074 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
PHGDH-209ENST00000641074 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
PHGDH-209ENST00000641074 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.56
PHGDH-209ENST00000641074 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
PHGDH-209ENST00000641074 INE1O15225 51 aa5.21□□□□□ -1.57
PHGDH-209ENST00000641074 LCE4AQ5TA78 99 aa5.21□□□□□ -1.57
PHGDH-209ENST00000641074 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
PHGDH-209ENST00000641074 MT4P47944 62 aa5.14□□□□□ -1.59
PHGDH-209ENST00000641074 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
PHGDH-209ENST00000641074 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
PHGDH-209ENST00000641074 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
PHGDH-209ENST00000641074 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
PHGDH-209ENST00000641074 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
PHGDH-209ENST00000641074 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
PHGDH-209ENST00000641074 MT3P25713 68 aa4.98□□□□□ -1.61
PHGDH-209ENST00000641074 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
PHGDH-209ENST00000641074 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
PHGDH-209ENST00000641074 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PHGDH-209ENST00000641074 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
PHGDH-209ENST00000641074 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
PHGDH-209ENST00000641074 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
PHGDH-209ENST00000641074 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
PHGDH-209ENST00000641074 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
PHGDH-209ENST00000641074 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
PHGDH-209ENST00000641074 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
PHGDH-209ENST00000641074 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
PHGDH-209ENST00000641074 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
PHGDH-209ENST00000641074 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
PHGDH-209ENST00000641074 PRM1P04553 51 aa4.11□□□□□ -1.75
PHGDH-209ENST00000641074 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
PHGDH-209ENST00000641074 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
PHGDH-209ENST00000641074 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
PHGDH-209ENST00000641074 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
PHGDH-209ENST00000641074 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
PHGDH-209ENST00000641074 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
PHGDH-209ENST00000641074 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
PHGDH-209ENST00000641074 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
PHGDH-209ENST00000641074 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
PHGDH-209ENST00000641074 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
PHGDH-209ENST00000641074 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
PHGDH-209ENST00000641074 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
PHGDH-209ENST00000641074 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
PHGDH-209ENST00000641074 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
PHGDH-209ENST00000641074 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
PHGDH-209ENST00000641074 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
PHGDH-209ENST00000641074 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 25.3 ms