RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
SCARB2-224ENST00000640880 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.94
SCARB2-224ENST00000640880 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
SCARB2-224ENST00000640880 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
SCARB2-224ENST00000640880 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
SCARB2-224ENST00000640880 KRTAP4-1Q9BYQ7 146 aa2.91□□□□□ -1.94
SCARB2-224ENST00000640880 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
SCARB2-224ENST00000640880 M0R2T5 61 aa2.88□□□□□ -1.95
SCARB2-224ENST00000640880 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
SCARB2-224ENST00000640880 MUC2Q02817 5179 aa2.82□□□□□ -1.96
SCARB2-224ENST00000640880 MT1HP80294 61 aa2.81□□□□□ -1.96
SCARB2-224ENST00000640880 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
SCARB2-224ENST00000640880 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
SCARB2-224ENST00000640880 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
SCARB2-224ENST00000640880 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
SCARB2-224ENST00000640880 TNP1P09430 55 aa2.69□□□□□ -1.98
SCARB2-224ENST00000640880 INE1O15225 51 aa2.67□□□□□ -1.98
SCARB2-224ENST00000640880 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
SCARB2-224ENST00000640880 MT2AP02795 61 aa2.64□□□□□ -1.99
SCARB2-224ENST00000640880 MT1FP04733 61 aa2.62□□□□□ -1.99
SCARB2-224ENST00000640880 CRCT1Q9UGL9 99 aa2.57□□□□□ -2
SCARB2-224ENST00000640880 LCE1CQ5T751 118 aa2.54□□□□□ -2
SCARB2-224ENST00000640880 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SCARB2-224ENST00000640880 SPRR2GQ9BYE4 73 aa2.5□□□□□ -2.01
SCARB2-224ENST00000640880 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
SCARB2-224ENST00000640880 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
SCARB2-224ENST00000640880 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
SCARB2-224ENST00000640880 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
SCARB2-224ENST00000640880 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
SCARB2-224ENST00000640880 MT1BP07438 61 aa2.42□□□□□ -2.02
SCARB2-224ENST00000640880 USH2AO75445 5202 aa2.42□□□□□ -2.02
SCARB2-224ENST00000640880 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
SCARB2-224ENST00000640880 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
SCARB2-224ENST00000640880 MT1XP80297 61 aa2.31□□□□□ -2.04
SCARB2-224ENST00000640880 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
SCARB2-224ENST00000640880 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
SCARB2-224ENST00000640880 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
SCARB2-224ENST00000640880 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
SCARB2-224ENST00000640880 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
SCARB2-224ENST00000640880 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
SCARB2-224ENST00000640880 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
SCARB2-224ENST00000640880 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SCARB2-224ENST00000640880 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
SCARB2-224ENST00000640880 SPRR2EP22531 72 aa2.14□□□□□ -2.07
SCARB2-224ENST00000640880 SPRR2BP35325 72 aa2.14□□□□□ -2.07
SCARB2-224ENST00000640880 SPRR2AP35326 72 aa2.14□□□□□ -2.07
SCARB2-224ENST00000640880 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
SCARB2-224ENST00000640880 KMT2DO14686 5537 aa2.1□□□□□ -2.07
SCARB2-224ENST00000640880 SPRR2DP22532 72 aa2.08□□□□□ -2.08
SCARB2-224ENST00000640880 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
SCARB2-224ENST00000640880 MUC12Q9UKN1 5478 aa2.05□□□□□ -2.08
SCARB2-224ENST00000640880 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
SCARB2-224ENST00000640880 MT1EP04732 61 aa2.04□□□□□ -2.08
SCARB2-224ENST00000640880 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
SCARB2-224ENST00000640880 NEBP20929 6669 aa2.03□□□□□ -2.08
SCARB2-224ENST00000640880 MT1GP13640 62 aa2□□□□□ -2.09
SCARB2-224ENST00000640880 MT1LQ93083 61 aa1.99□□□□□ -2.09
SCARB2-224ENST00000640880 MT1MQ8N339 61 aa1.95□□□□□ -2.1
SCARB2-224ENST00000640880 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
SCARB2-224ENST00000640880 MT1AP04731 61 aa1.87□□□□□ -2.11
SCARB2-224ENST00000640880 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.12
SCARB2-224ENST00000640880 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SCARB2-224ENST00000640880 MT4P47944 62 aa1.8□□□□□ -2.12
SCARB2-224ENST00000640880 PRM1P04553 51 aa1.74□□□□□ -2.13
SCARB2-224ENST00000640880 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
SCARB2-224ENST00000640880 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SCARB2-224ENST00000640880 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.14
SCARB2-224ENST00000640880 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
SCARB2-224ENST00000640880 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
SCARB2-224ENST00000640880 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SCARB2-224ENST00000640880 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
SCARB2-224ENST00000640880 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
SCARB2-224ENST00000640880 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
SCARB2-224ENST00000640880 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
SCARB2-224ENST00000640880 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
SCARB2-224ENST00000640880 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
SCARB2-224ENST00000640880 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
SCARB2-224ENST00000640880 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 17.9 ms