RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 MT1HL1P0DM35 61 aa0.94□□□□□ -2.26
RTTN-217ENST00000640393 PRLHP81277 87 aa0.94□□□□□ -2.26
RTTN-217ENST00000640393 RHPN1-AS1Q9BWJ2 59 aa0.94□□□□□ -2.26
RTTN-217ENST00000640393 DNAH5Q8TE73 4624 aa0.94□□□□□ -2.26
RTTN-217ENST00000640393 LRP1BQ9NZR2 4599 aa0.93□□□□□ -2.26
RTTN-217ENST00000640393 S4R3F8 94 aa0.93□□□□□ -2.26
RTTN-217ENST00000640393 FAT1Q14517 4588 aa0.93□□□□□ -2.26
RTTN-217ENST00000640393 HTN3P15516 51 aa0.92□□□□□ -2.26
RTTN-217ENST00000640393 PKHD1L1Q86WI1 4243 aa0.92□□□□□ -2.26
RTTN-217ENST00000640393 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
RTTN-217ENST00000640393 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
RTTN-217ENST00000640393 KRTAP20-1Q3LI63 56 aa0.9□□□□□ -2.27
RTTN-217ENST00000640393 FAT3Q8TDW7 4589 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 LPAP08519 4548 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 SPINK1P00995 79 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 HTN1P15515 57 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 SSPOA2VEC9 5147 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 TNXBP22105 4242 aa0.89□□□□□ -2.27
RTTN-217ENST00000640393 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
RTTN-217ENST00000640393 NEBP20929 6669 aa0.88□□□□□ -2.27
RTTN-217ENST00000640393 M0QZ58 72 aa0.88□□□□□ -2.27
RTTN-217ENST00000640393 DEFB1P60022 68 aa0.88□□□□□ -2.27
RTTN-217ENST00000640393 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
RTTN-217ENST00000640393 DNAH8Q96JB1 4490 aa0.87□□□□□ -2.27
RTTN-217ENST00000640393 USH2AO75445 5202 aa0.85□□□□□ -2.27
RTTN-217ENST00000640393 H3BNG1 76 aa0.83□□□□□ -2.28
RTTN-217ENST00000640393 M0R2T5 61 aa0.83□□□□□ -2.28
RTTN-217ENST00000640393 A0A096LPF7 62 aa0.83□□□□□ -2.28
RTTN-217ENST00000640393 MT1HP80294 61 aa0.83□□□□□ -2.28
RTTN-217ENST00000640393 GPR98Q8WXG9 6306 aa0.82□□□□□ -2.28
RTTN-217ENST00000640393 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
RTTN-217ENST00000640393 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
RTTN-217ENST00000640393 LINC01556Q5JQF7 62 aa0.81□□□□□ -2.28
RTTN-217ENST00000640393 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
RTTN-217ENST00000640393 SPINK6Q6UWN8 80 aa0.8□□□□□ -2.28
RTTN-217ENST00000640393 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
RTTN-217ENST00000640393 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
RTTN-217ENST00000640393 A0A096LNI7 61 aa0.78□□□□□ -2.28
RTTN-217ENST00000640393 TNP1P09430 55 aa0.78□□□□□ -2.28
RTTN-217ENST00000640393 KRTAP19-2Q3LHN2 52 aa0.78□□□□□ -2.28
RTTN-217ENST00000640393 C9orf92A6NGG3 77 aa0.77□□□□□ -2.29
RTTN-217ENST00000640393 RPS29P62273 56 aaKnown RBP0.77□□□□□ -2.29
RTTN-217ENST00000640393 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
RTTN-217ENST00000640393 KMT2DO14686 5537 aa0.77□□□□□ -2.29
RTTN-217ENST00000640393 MUC17Q685J3 4493 aa0.76□□□□□ -2.29
RTTN-217ENST00000640393 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
RTTN-217ENST00000640393 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
RTTN-217ENST00000640393 SPRR2EP22531 72 aa0.73□□□□□ -2.29
RTTN-217ENST00000640393 SPRR2BP35325 72 aa0.73□□□□□ -2.29
RTTN-217ENST00000640393 SPRR2AP35326 72 aa0.73□□□□□ -2.29
RTTN-217ENST00000640393 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
RTTN-217ENST00000640393 MT2AP02795 61 aa0.72□□□□□ -2.29
RTTN-217ENST00000640393 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
RTTN-217ENST00000640393 MT1FP04733 61 aa0.71□□□□□ -2.3
RTTN-217ENST00000640393 SPRR2DP22532 72 aa0.71□□□□□ -2.3
RTTN-217ENST00000640393 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
RTTN-217ENST00000640393 SPRR2FQ96RM1 72 aa0.7□□□□□ -2.3
RTTN-217ENST00000640393 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
RTTN-217ENST00000640393 MT4P47944 62 aa0.66□□□□□ -2.3
RTTN-217ENST00000640393 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
RTTN-217ENST00000640393 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
RTTN-217ENST00000640393 MT1BP07438 61 aa0.59□□□□□ -2.31
RTTN-217ENST00000640393 PRM1P04553 51 aa0.58□□□□□ -2.32
RTTN-217ENST00000640393 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
RTTN-217ENST00000640393 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
RTTN-217ENST00000640393 MT1AP04731 61 aa0.56□□□□□ -2.32
RTTN-217ENST00000640393 KRTAP19-8Q3LI54 63 aa0.55□□□□□ -2.32
RTTN-217ENST00000640393 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
RTTN-217ENST00000640393 KRTAP20-2Q3LI61 65 aa0.54□□□□□ -2.32
RTTN-217ENST00000640393 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
RTTN-217ENST00000640393 MT1XP80297 61 aa0.51□□□□□ -2.33
RTTN-217ENST00000640393 MT1EP04732 61 aa0.49□□□□□ -2.33
RTTN-217ENST00000640393 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
RTTN-217ENST00000640393 MT1MQ8N339 61 aa0.46□□□□□ -2.34
RTTN-217ENST00000640393 MT1LQ93083 61 aa0.46□□□□□ -2.34
RTTN-217ENST00000640393 MT1GP13640 62 aa0.45□□□□□ -2.34
RTTN-217ENST00000640393 KRTAP19-7Q3SYF9 63 aa0.45□□□□□ -2.34
RTTN-217ENST00000640393 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms