RNA–Protein interactions for RNA: ENST00000639596.1

MED17-220, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-220ENST00000639596 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
MED17-220ENST00000639596 KRTAP5-9P26371 169 aa7.28□□□□□ -1.24
MED17-220ENST00000639596 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
MED17-220ENST00000639596 MT1EP04732 61 aa7.17□□□□□ -1.26
MED17-220ENST00000639596 MDN1Q9NU22 5596 aa7.17□□□□□ -1.26
MED17-220ENST00000639596 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
MED17-220ENST00000639596 NEBP20929 6669 aa7.1□□□□□ -1.27
MED17-220ENST00000639596 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
MED17-220ENST00000639596 MT1LQ93083 61 aa6.97□□□□□ -1.29
MED17-220ENST00000639596 INE1O15225 51 aa6.94□□□□□ -1.3
MED17-220ENST00000639596 SPRR2EP22531 72 aa6.94□□□□□ -1.3
MED17-220ENST00000639596 SPRR2BP35325 72 aa6.94□□□□□ -1.3
MED17-220ENST00000639596 SPRR2AP35326 72 aa6.94□□□□□ -1.3
MED17-220ENST00000639596 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
MED17-220ENST00000639596 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
MED17-220ENST00000639596 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
MED17-220ENST00000639596 MT1GP13640 62 aa6.82□□□□□ -1.32
MED17-220ENST00000639596 MT1MQ8N339 61 aa6.77□□□□□ -1.33
MED17-220ENST00000639596 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
MED17-220ENST00000639596 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
MED17-220ENST00000639596 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
MED17-220ENST00000639596 SPRR2DP22532 72 aa6.68□□□□□ -1.34
MED17-220ENST00000639596 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
MED17-220ENST00000639596 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
MED17-220ENST00000639596 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
MED17-220ENST00000639596 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
MED17-220ENST00000639596 KRTAP2-2Q9BYT5 123 aa6.55□□□□□ -1.36
MED17-220ENST00000639596 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
MED17-220ENST00000639596 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
MED17-220ENST00000639596 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
MED17-220ENST00000639596 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
MED17-220ENST00000639596 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
MED17-220ENST00000639596 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
MED17-220ENST00000639596 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
MED17-220ENST00000639596 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
MED17-220ENST00000639596 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
MED17-220ENST00000639596 MT1AP04731 61 aa5.9□□□□□ -1.46
MED17-220ENST00000639596 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.47
MED17-220ENST00000639596 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
MED17-220ENST00000639596 MT4P47944 62 aa5.84□□□□□ -1.47
MED17-220ENST00000639596 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
MED17-220ENST00000639596 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
MED17-220ENST00000639596 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
MED17-220ENST00000639596 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
MED17-220ENST00000639596 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
MED17-220ENST00000639596 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
MED17-220ENST00000639596 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
MED17-220ENST00000639596 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
MED17-220ENST00000639596 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
MED17-220ENST00000639596 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
MED17-220ENST00000639596 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
MED17-220ENST00000639596 MT3P25713 68 aa5.34□□□□□ -1.55
MED17-220ENST00000639596 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
MED17-220ENST00000639596 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
MED17-220ENST00000639596 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
MED17-220ENST00000639596 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
MED17-220ENST00000639596 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
MED17-220ENST00000639596 PRM1P04553 51 aa4.8□□□□□ -1.64
MED17-220ENST00000639596 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
MED17-220ENST00000639596 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
MED17-220ENST00000639596 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
MED17-220ENST00000639596 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
MED17-220ENST00000639596 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
MED17-220ENST00000639596 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
MED17-220ENST00000639596 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
MED17-220ENST00000639596 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
MED17-220ENST00000639596 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
MED17-220ENST00000639596 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
MED17-220ENST00000639596 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
MED17-220ENST00000639596 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
MED17-220ENST00000639596 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
MED17-220ENST00000639596 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
MED17-220ENST00000639596 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
MED17-220ENST00000639596 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
MED17-220ENST00000639596 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
MED17-220ENST00000639596 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
MED17-220ENST00000639596 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
MED17-220ENST00000639596 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 108.9 ms