RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
CHD2-227ENST00000637572 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
CHD2-227ENST00000637572 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
CHD2-227ENST00000637572 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
CHD2-227ENST00000637572 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
CHD2-227ENST00000637572 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
CHD2-227ENST00000637572 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
CHD2-227ENST00000637572 SPRR2EP22531 72 aa2.23□□□□□ -2.05
CHD2-227ENST00000637572 SPRR2BP35325 72 aa2.23□□□□□ -2.05
CHD2-227ENST00000637572 SPRR2AP35326 72 aa2.23□□□□□ -2.05
CHD2-227ENST00000637572 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
CHD2-227ENST00000637572 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
CHD2-227ENST00000637572 KRTAP8-1Q8IUC2 63 aa2.22□□□□□ -2.05
CHD2-227ENST00000637572 KRTAP4-7Q9BYR0 210 aa2.22□□□□□ -2.05
CHD2-227ENST00000637572 USH2AO75445 5202 aa2.22□□□□□ -2.05
CHD2-227ENST00000637572 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
CHD2-227ENST00000637572 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CHD2-227ENST00000637572 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
CHD2-227ENST00000637572 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
CHD2-227ENST00000637572 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
CHD2-227ENST00000637572 SPRR2DP22532 72 aa2.16□□□□□ -2.06
CHD2-227ENST00000637572 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.06
CHD2-227ENST00000637572 MT1BP07438 61 aa2.15□□□□□ -2.07
CHD2-227ENST00000637572 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
CHD2-227ENST00000637572 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
CHD2-227ENST00000637572 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
CHD2-227ENST00000637572 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
CHD2-227ENST00000637572 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
CHD2-227ENST00000637572 MT1XP80297 61 aa2.11□□□□□ -2.07
CHD2-227ENST00000637572 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
CHD2-227ENST00000637572 KRTAP10-7P60409 375 aaPredicted RBP2.05□□□□□ -2.08
CHD2-227ENST00000637572 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
CHD2-227ENST00000637572 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
CHD2-227ENST00000637572 INE1O15225 51 aa2.01□□□□□ -2.09
CHD2-227ENST00000637572 MT1GP13640 62 aa1.98□□□□□ -2.09
CHD2-227ENST00000637572 MT4P47944 62 aa1.98□□□□□ -2.09
CHD2-227ENST00000637572 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
CHD2-227ENST00000637572 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
CHD2-227ENST00000637572 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
CHD2-227ENST00000637572 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
CHD2-227ENST00000637572 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
CHD2-227ENST00000637572 MT1EP04732 61 aa1.91□□□□□ -2.1
CHD2-227ENST00000637572 MT1LQ93083 61 aa1.89□□□□□ -2.11
CHD2-227ENST00000637572 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
CHD2-227ENST00000637572 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
CHD2-227ENST00000637572 KRTAP12-4P60329 112 aa1.84□□□□□ -2.12
CHD2-227ENST00000637572 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
CHD2-227ENST00000637572 MT1MQ8N339 61 aa1.82□□□□□ -2.12
CHD2-227ENST00000637572 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
CHD2-227ENST00000637572 KRTAP5-9P26371 169 aa1.76□□□□□ -2.13
CHD2-227ENST00000637572 MT1AP04731 61 aa1.69□□□□□ -2.14
CHD2-227ENST00000637572 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
CHD2-227ENST00000637572 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
CHD2-227ENST00000637572 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
CHD2-227ENST00000637572 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
CHD2-227ENST00000637572 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CHD2-227ENST00000637572 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CHD2-227ENST00000637572 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CHD2-227ENST00000637572 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
CHD2-227ENST00000637572 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
CHD2-227ENST00000637572 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
CHD2-227ENST00000637572 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
CHD2-227ENST00000637572 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
CHD2-227ENST00000637572 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
CHD2-227ENST00000637572 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
CHD2-227ENST00000637572 PRM1P04553 51 aa1.39□□□□□ -2.19
CHD2-227ENST00000637572 KRTAP5-4Q6L8H1 288 aa1.39□□□□□ -2.19
CHD2-227ENST00000637572 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
CHD2-227ENST00000637572 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
CHD2-227ENST00000637572 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
CHD2-227ENST00000637572 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
CHD2-227ENST00000637572 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
CHD2-227ENST00000637572 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
CHD2-227ENST00000637572 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
CHD2-227ENST00000637572 KRTAP4-4Q9BYR3 166 aa1.13□□□□□ -2.23
CHD2-227ENST00000637572 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
CHD2-227ENST00000637572 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
CHD2-227ENST00000637572 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 87.1 ms