RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 M0QZ58 72 aa3.99□□□□□ -1.77
SMN2-214ENST00000626847 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
SMN2-214ENST00000626847 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SMN2-214ENST00000626847 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SMN2-214ENST00000626847 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
SMN2-214ENST00000626847 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
SMN2-214ENST00000626847 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
SMN2-214ENST00000626847 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
SMN2-214ENST00000626847 USH2AO75445 5202 aa3.82□□□□□ -1.8
SMN2-214ENST00000626847 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
SMN2-214ENST00000626847 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
SMN2-214ENST00000626847 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
SMN2-214ENST00000626847 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
SMN2-214ENST00000626847 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SMN2-214ENST00000626847 MT1HP80294 61 aa3.72□□□□□ -1.81
SMN2-214ENST00000626847 KMT2DO14686 5537 aa3.72□□□□□ -1.81
SMN2-214ENST00000626847 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
SMN2-214ENST00000626847 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
SMN2-214ENST00000626847 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
SMN2-214ENST00000626847 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
SMN2-214ENST00000626847 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SMN2-214ENST00000626847 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SMN2-214ENST00000626847 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.84
SMN2-214ENST00000626847 M0R2T5 61 aa3.56□□□□□ -1.84
SMN2-214ENST00000626847 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
SMN2-214ENST00000626847 TNP1P09430 55 aa3.55□□□□□ -1.84
SMN2-214ENST00000626847 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
SMN2-214ENST00000626847 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
SMN2-214ENST00000626847 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
SMN2-214ENST00000626847 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
SMN2-214ENST00000626847 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
SMN2-214ENST00000626847 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
SMN2-214ENST00000626847 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
SMN2-214ENST00000626847 MT2AP02795 61 aa3.32□□□□□ -1.88
SMN2-214ENST00000626847 MT1FP04733 61 aa3.3□□□□□ -1.88
SMN2-214ENST00000626847 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
SMN2-214ENST00000626847 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
SMN2-214ENST00000626847 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
SMN2-214ENST00000626847 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
SMN2-214ENST00000626847 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
SMN2-214ENST00000626847 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
SMN2-214ENST00000626847 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
SMN2-214ENST00000626847 SPRR2EP22531 72 aa3.08□□□□□ -1.92
SMN2-214ENST00000626847 SPRR2BP35325 72 aa3.08□□□□□ -1.92
SMN2-214ENST00000626847 SPRR2AP35326 72 aa3.08□□□□□ -1.92
SMN2-214ENST00000626847 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
SMN2-214ENST00000626847 SPRR2DP22532 72 aa2.99□□□□□ -1.93
SMN2-214ENST00000626847 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
SMN2-214ENST00000626847 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
SMN2-214ENST00000626847 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
SMN2-214ENST00000626847 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
SMN2-214ENST00000626847 MT1BP07438 61 aa2.88□□□□□ -1.95
SMN2-214ENST00000626847 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
SMN2-214ENST00000626847 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
SMN2-214ENST00000626847 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
SMN2-214ENST00000626847 KRTAP19-8Q3LI54 63 aa2.76□□□□□ -1.97
SMN2-214ENST00000626847 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
SMN2-214ENST00000626847 MT4P47944 62 aa2.67□□□□□ -1.98
SMN2-214ENST00000626847 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
SMN2-214ENST00000626847 MT1XP80297 61 aa2.56□□□□□ -2
SMN2-214ENST00000626847 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SMN2-214ENST00000626847 PRM1P04553 51 aa2.51□□□□□ -2.01
SMN2-214ENST00000626847 MT1AP04731 61 aa2.47□□□□□ -2.01
SMN2-214ENST00000626847 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
SMN2-214ENST00000626847 MT1EP04732 61 aa2.37□□□□□ -2.03
SMN2-214ENST00000626847 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
SMN2-214ENST00000626847 MT1LQ93083 61 aa2.31□□□□□ -2.04
SMN2-214ENST00000626847 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
SMN2-214ENST00000626847 MT1GP13640 62 aa2.25□□□□□ -2.05
SMN2-214ENST00000626847 MT1MQ8N339 61 aa2.23□□□□□ -2.05
SMN2-214ENST00000626847 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
SMN2-214ENST00000626847 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
SMN2-214ENST00000626847 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SMN2-214ENST00000626847 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
SMN2-214ENST00000626847 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
SMN2-214ENST00000626847 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SMN2-214ENST00000626847 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 159.6 ms