RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
PTP4A1-205ENST00000626021 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
PTP4A1-205ENST00000626021 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
PTP4A1-205ENST00000626021 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
PTP4A1-205ENST00000626021 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
PTP4A1-205ENST00000626021 INE1O15225 51 aa1.77□□□□□ -2.13
PTP4A1-205ENST00000626021 MT1HP80294 61 aa1.74□□□□□ -2.13
PTP4A1-205ENST00000626021 KRTAP10-5P60370 271 aa1.73□□□□□ -2.13
PTP4A1-205ENST00000626021 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
PTP4A1-205ENST00000626021 FAT4Q6V0I7 4981 aa1.72□□□□□ -2.13
PTP4A1-205ENST00000626021 UBR4Q5T4S7 5183 aa1.72□□□□□ -2.13
PTP4A1-205ENST00000626021 MUC2Q02817 5179 aa1.71□□□□□ -2.14
PTP4A1-205ENST00000626021 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
PTP4A1-205ENST00000626021 MT2AP02795 61 aa1.7□□□□□ -2.14
PTP4A1-205ENST00000626021 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
PTP4A1-205ENST00000626021 MT1FP04733 61 aa1.68□□□□□ -2.14
PTP4A1-205ENST00000626021 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
PTP4A1-205ENST00000626021 M0R2T5 61 aa1.66□□□□□ -2.14
PTP4A1-205ENST00000626021 LCE1FQ5T754 118 aa1.66□□□□□ -2.14
PTP4A1-205ENST00000626021 KRTAP10-10P60014 251 aa1.64□□□□□ -2.15
PTP4A1-205ENST00000626021 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
PTP4A1-205ENST00000626021 MT1BP07438 61 aa1.63□□□□□ -2.15
PTP4A1-205ENST00000626021 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
PTP4A1-205ENST00000626021 MT1XP80297 61 aa1.59□□□□□ -2.15
PTP4A1-205ENST00000626021 LCE3CQ5T5A8 94 aa1.58□□□□□ -2.16
PTP4A1-205ENST00000626021 USH2AO75445 5202 aa1.53□□□□□ -2.16
PTP4A1-205ENST00000626021 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
PTP4A1-205ENST00000626021 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
PTP4A1-205ENST00000626021 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
PTP4A1-205ENST00000626021 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
PTP4A1-205ENST00000626021 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
PTP4A1-205ENST00000626021 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
PTP4A1-205ENST00000626021 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
PTP4A1-205ENST00000626021 LCE3EQ5T5B0 92 aa1.46□□□□□ -2.18
PTP4A1-205ENST00000626021 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
PTP4A1-205ENST00000626021 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
PTP4A1-205ENST00000626021 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
PTP4A1-205ENST00000626021 MT1EP04732 61 aa1.39□□□□□ -2.19
PTP4A1-205ENST00000626021 MT1LQ93083 61 aa1.39□□□□□ -2.19
PTP4A1-205ENST00000626021 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
PTP4A1-205ENST00000626021 KMT2DO14686 5537 aa1.37□□□□□ -2.19
PTP4A1-205ENST00000626021 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
PTP4A1-205ENST00000626021 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
PTP4A1-205ENST00000626021 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
PTP4A1-205ENST00000626021 MT1MQ8N339 61 aa1.31□□□□□ -2.2
PTP4A1-205ENST00000626021 MT1GP13640 62 aa1.3□□□□□ -2.2
PTP4A1-205ENST00000626021 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
PTP4A1-205ENST00000626021 MT1AP04731 61 aa1.28□□□□□ -2.2
PTP4A1-205ENST00000626021 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
PTP4A1-205ENST00000626021 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
PTP4A1-205ENST00000626021 FSIP2Q5CZC0 6907 aa1.26□□□□□ -2.21
PTP4A1-205ENST00000626021 MACF1Q9UPN3 7388 aaKnown RBP1.24□□□□□ -2.21
PTP4A1-205ENST00000626021 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
PTP4A1-205ENST00000626021 LCE3DQ9BYE3 92 aa1.21□□□□□ -2.21
PTP4A1-205ENST00000626021 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
PTP4A1-205ENST00000626021 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
PTP4A1-205ENST00000626021 SPRR2EP22531 72 aa1.19□□□□□ -2.22
PTP4A1-205ENST00000626021 SPRR2BP35325 72 aa1.19□□□□□ -2.22
PTP4A1-205ENST00000626021 SPRR2AP35326 72 aa1.19□□□□□ -2.22
PTP4A1-205ENST00000626021 PRM1P04553 51 aa1.18□□□□□ -2.22
PTP4A1-205ENST00000626021 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
PTP4A1-205ENST00000626021 SYNE2Q8WXH0 6885 aaKnown RBP1.16□□□□□ -2.22
PTP4A1-205ENST00000626021 NEBP20929 6669 aa1.15□□□□□ -2.23
PTP4A1-205ENST00000626021 SPRR2DP22532 72 aa1.15□□□□□ -2.23
PTP4A1-205ENST00000626021 KRTAP20-1Q3LI63 56 aa1.12□□□□□ -2.23
PTP4A1-205ENST00000626021 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
PTP4A1-205ENST00000626021 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
PTP4A1-205ENST00000626021 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
PTP4A1-205ENST00000626021 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
PTP4A1-205ENST00000626021 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
PTP4A1-205ENST00000626021 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
PTP4A1-205ENST00000626021 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
PTP4A1-205ENST00000626021 MT4P47944 62 aa0.96□□□□□ -2.26
PTP4A1-205ENST00000626021 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
PTP4A1-205ENST00000626021 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
PTP4A1-205ENST00000626021 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
PTP4A1-205ENST00000626021 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 366.9 ms